Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., diguanylate cyclase (RefSeq) from Shewanella amazonensis SB2B

 Score = 97.4 bits (241), Expect = 9e-25
 Identities = 72/189 (38%), Positives = 98/189 (51%), Gaps = 15/189 (7%)

Query: 228 LRERELRQQIERWESYYRTIAEQDTLTGLKNRLGCEKFVLRKQR----ASTTMVLLLIDL 283
           + ER  R+++ R+E      AE D LT LKNR   E+ ++   R      T M +LLIDL
Sbjct: 345 ITERTYRERMIRFE------AEHDPLTQLKNRRSGERLLVDMMRKVDQTRTLMGVLLIDL 398

Query: 284 DGFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAES 343
           D FK VND  GH AGD VL+ +A+R   L      D +  R GGDEF I I   +     
Sbjct: 399 DKFKPVNDIYGHEAGDSVLKTVAERLVKLV----GDGIAIRWGGDEFLIGITDVDEDYNK 454

Query: 344 IERFAAQLIESSSEPIGL-GQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRG 402
           +   A +++   S PI + G  S +V  S+GI+        LE LL  AD AMY VK +G
Sbjct: 455 LRLLAQEILVQVSRPIAIRGSLSCEVDASVGIAIYPHHGHTLEALLEAADVAMYEVKEQG 514

Query: 403 KHGYHIYRM 411
           +  + I R+
Sbjct: 515 RGSFRIGRI 523



 Score = 65.1 bits (157), Expect = 5e-15
 Identities = 44/203 (21%), Positives = 101/203 (49%), Gaps = 6/203 (2%)

Query: 51  KLALSLSNSAAIALYVNNYDIASEVMDALLLHQEINAVKLASVDGIVFERTTIPSTYKEQ 110
           ++AL++  +A++ALYV + ++  E+++ L ++  +    L +  G       + S+    
Sbjct: 49  QIALTVQKTASVALYVKDVELGKEIVEGLEVNDLVAGALLTADSG-----DWVSSSGFAA 103

Query: 111 NYWSDANRYRLDSPV-DGNLIGYLMIHEDHQVIRQQAINQILDQIAVVLIQFLVTFIALI 169
           +       + +  P   G ++G L +  +++ I+ +A    L Q  ++++Q  +  + + 
Sbjct: 104 DDLLQVLEFDIPHPFFAGEVLGKLKLLPNNEYIQSRATEVALKQAWMLVLQSALIALLVS 163

Query: 170 WIVRRLVGKPLTDLSQALSEVRPDHDRKVAVAAEDHHNEIGLVAKSINEFIDASHQALLR 229
            +V + +  PL  L+     ++P  +  + V      +EIG + + IN+ +   +Q++ +
Sbjct: 164 LLVHKTLTAPLNRLTSNFENIKPGDNDPLNVPKYHAQDEIGSLVRGINQLVANLNQSIEK 223

Query: 230 ERELRQQIERWESYYRTIAEQDT 252
           ER LRQ+ E  E  +R I E+ T
Sbjct: 224 ERSLRQRTELLERKFRLIFERAT 246