Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (268), Expect = 9e-28
 Identities = 109/419 (26%), Positives = 183/419 (43%), Gaps = 57/419 (13%)

Query: 11  VNRLLKMISLCALGYLLIILAIIIPRGIQSVEQQKQELEEKLALSLSNSAAIALYVNNYD 70
           V+ L   +SL  LG   + LA        + ++    L ++ A SL +  + AL+  + +
Sbjct: 14  VSLLSLAVSLGFLGMQTVWLA-------SAADRDYLILRDRTASSLQSGLSNALWNFDAE 66

Query: 71  IASEVMDALLLHQEINAVKLASVDGIVF------ERTTIPSTYKEQNYWSDANR------ 118
            A  ++   L    I ++ +   +G VF      +    PS ++    W    +      
Sbjct: 67  TAKAIISDALRANPIRSIHVIDSNGRVFADGQSAQPVVAPSLWESYLGWLVDLKSEMTLD 126

Query: 119 YRLDSPVD----GNLIGYLMIHEDHQVIRQQAINQILDQIAVVLIQFLVTFIALIWIVRR 174
            R  SP D    G ++G++ I  D     +   +++ DQ+  +L+  LV  +    +   
Sbjct: 127 LRFSSPTDDHYQGMVVGFVFITFDKDHFIRGIADRLADQVLGILVIVLVVALTTSIVFHL 186

Query: 175 LVGKPLTDLSQALSEVRPDHDRKVAVAAEDHH--NEIGLVAKSINEFIDASHQALLRERE 232
            + +P+  +++ +++V P+      +     H  NEIG +   +N  +        R  E
Sbjct: 187 FISRPIIRVARGVADVDPEDPAATVLTVPRAHQRNEIGRMTNRLNHLLG-------RLAE 239

Query: 233 LRQQIERWESYYRTIAEQDTLTGLKNRLGCEKFVLRKQRASTTMVLL--------LIDLD 284
           ++ ++       R +A +D LT L NR      +L    A+   V L         +DLD
Sbjct: 240 VQGEL-------RLLATRDPLTDLPNR----SLILEMMDATINRVALDGGRCAVMFLDLD 288

Query: 285 GFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAE-S 343
            FK VND+LGH AGD +L++I +RF A+         VGRLGGDEF + I  D +  E  
Sbjct: 289 MFKHVNDSLGHEAGDLILKDIGRRFDAVVA---GLGAVGRLGGDEFVVLI--DRYEREDD 343

Query: 344 IERFAAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRG 402
           + R A +LI +   PI +         S+GI+         + LL  AD AMY VK  G
Sbjct: 344 LARIARRLITTVKRPIEVDGTLVHSSTSVGIACYPVDGATPQGLLRNADTAMYAVKASG 402