Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1010 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  104 bits (259), Expect = 1e-26
 Identities = 67/167 (40%), Positives = 95/167 (56%), Gaps = 10/167 (5%)

Query: 248 AEQDTLTGLKNRLGCEKF----VLRKQRASTTMVLLLIDLDGFKQVNDTLGHAAGDEVLR 303
           A  D LTGL NR    ++    +LR  R  +   L+ +DLD FK+VNDTLGH  GD +L+
Sbjct: 581 ANYDPLTGLPNRRMLLEYLNTEILRIDRNHSHFALMFLDLDFFKEVNDTLGHDMGDLLLQ 640

Query: 304 EIAKRFYALAQTHFSDFVVGRLGGDEFAIYIP-LDEFVAESIERFAAQLIESSSEPIGLG 362
           E AKR     +   SD VV RLGGDEF + +  +D      +ER A  ++E  +EP  LG
Sbjct: 641 ETAKRLKGCIRE--SD-VVARLGGDEFTVVLSGIDS--PSGVERVAQSILERIAEPYSLG 695

Query: 363 QQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
            ++A +  SIGI+        +E LL  AD+AMY  K +G++ +H +
Sbjct: 696 DETAYISASIGITIYPDDATSIEGLLKHADQAMYAAKEQGRNRFHYF 742