Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 882 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella loihica PV-4

 Score = 92.8 bits (229), Expect = 4e-23
 Identities = 85/259 (32%), Positives = 116/259 (44%), Gaps = 38/259 (14%)

Query: 158 LIQFLVTFIALIWIVRRLVGKPLTDLSQALSEVRPDHDRKVAVAAEDHHNEIGLVAKSIN 217
           L+ F+   IA   I R+L  + L    + L E      R +A+  +D   EI    K   
Sbjct: 386 LLTFVSQHIAAA-IERKLSAESLKQSYEQLEEKVAQRTRALAMLNQDLEKEIAQRRKVEQ 444

Query: 218 EFI-DASHQALLRERELRQQIERWESYYRTIAEQDTLTGLKNRLGCEKFVLR-----KQR 271
           + + DASH                          DTLTGL NR    + + +     ++ 
Sbjct: 445 QLVHDASH--------------------------DTLTGLPNRAMFMERLAQAVKHVRRH 478

Query: 272 ASTTMVLLLIDLDGFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFA 331
           A     LL IDLD FK +NDTLGH  GD  L E A+R     +   S+  +GR+GGDEF 
Sbjct: 479 ARDRFALLFIDLDRFKLINDTLGHLQGDRFLIETARRLNLCIR---SNDTLGRIGGDEFV 535

Query: 332 IYIPLDEFVAESIERFAAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDL-EKLLLQ 390
           I +      +++IE  A +++   SEP  L  QS   G SIGI+       D  E LL  
Sbjct: 536 ILLDSINTNSDAIE-VAERILGELSEPYQLSNQSFTSGASIGIAFSGHSSGDTSESLLKD 594

Query: 391 ADKAMYWVKYRGKHGYHIY 409
           AD AMY  K  GK  + I+
Sbjct: 595 ADAAMYQAKSNGKGCFVIF 613