Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 998 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 93.6 bits (231), Expect = 3e-23
 Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 8/166 (4%)

Query: 248 AEQDTLTGLKNRLGCEKFVLRK----QRASTTMVLLLIDLDGFKQVNDTLGHAAGDEVLR 303
           A  DTLTGL NR    +++  +     R      L+ +DLD FK+VNDTLGHA GD +L 
Sbjct: 572 ANYDTLTGLPNRRMLLEYLSAEIKTADRNRNHFALMFLDLDYFKEVNDTLGHAMGDLLLI 631

Query: 304 EIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIESSSEPIGLGQ 363
           E A R  +  +   +D VV RLGGDEF + +       + IER A  ++   +EP  LG+
Sbjct: 632 ETASRLKSCVRD--AD-VVARLGGDEFTVVLS-SMADHKGIERVAEHILRRIAEPYYLGE 687

Query: 364 QSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
           ++  +  SIGI+        +E LL  AD+AMY  K +G++ ++ +
Sbjct: 688 ETTHISASIGITLYPDDSPSIEGLLKHADQAMYAAKDQGRNRFNYF 733