Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 8/169 (4%)

Query: 245 RTIAEQDTLTGLKNRLGCE----KFVLRKQRASTTMVLLLIDLDGFKQVNDTLGHAAGDE 300
           + +AE D+LT L NR G E    + + R +R++  + ++L+DLD FK +NDTLGH  GD 
Sbjct: 139 KELAEHDSLTKLMNRYGFELCLNRAIARVKRSNDLLAVILLDLDDFKAINDTLGHQTGDI 198

Query: 301 VLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIESSSEPIG 360
           +L ++A R   + +      V+ RLGGDEF + +  +++    +   A +L+++  E   
Sbjct: 199 LLVKVASRLSTVLR---DGDVIARLGGDEFVVLVTDNDYKYFPM-IVANRLLKAFEEVFC 254

Query: 361 LGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
           LG     +G SIG++  N    D  +L+  AD AMY  K  G++    Y
Sbjct: 255 LGDNDVMIGASIGVAFYNEAASDSSELMKCADIAMYRAKKMGRNQIQFY 303