Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1009 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 79/235 (33%), Positives = 119/235 (50%), Gaps = 24/235 (10%)

Query: 188 SEVRPDHDRKVAVAAEDHHNEIGLVAKSINEFIDASHQ-----ALLRERELRQQIER--W 240
           +E+R   + +  +     +NE  ++  +IN   D   Q     AL  +   ++Q E   W
Sbjct: 519 NEIREKGEWQGEMRQRRKNNEEYVIWLTINTIKDKDGQPYRRVALFSDITDKKQSEHLIW 578

Query: 241 ESYYRTIAEQDTLTGLKNR------LGCEKFVLRKQRASTTMVLLLIDLDGFKQVNDTLG 294
           +      A  DTLTGL NR      LG E  +    R      L+ +DLD FK+VNDTLG
Sbjct: 579 KQ-----ANYDTLTGLPNRRMLLEYLGAE--IKSADRNRNHFALMFLDLDYFKEVNDTLG 631

Query: 295 HAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIES 354
           HA GD +L E A R  +  +   +D VV RLGGDEF + +       + IER A  ++  
Sbjct: 632 HAMGDLLLIETASRLKSCVRD--AD-VVARLGGDEFTVVLS-SMVDHKGIERVAEHILRR 687

Query: 355 SSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
            +EP  LG+++A +  SIGI+        +E LL  AD+AMY  K +G++ ++ +
Sbjct: 688 IAEPYVLGEETAYISASIGITLYPDDATSIEGLLKHADQAMYAAKDQGRNRFNYF 742