Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 929 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  240 bits (613), Expect = 3e-67
 Identities = 156/534 (29%), Positives = 287/534 (53%), Gaps = 32/534 (5%)

Query: 274 NVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIE 333
           ++  D+A   A+  A  K+EFLA +SHE+RTP+NGV+G T  +L T L+  Q DY+QTI 
Sbjct: 383 SISRDLAASNAEINA--KAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIH 440

Query: 334 KSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKID 393
            + N LLT+IN+ILD S+LE+G++ L+++ F+   ++E+ +++    A ++ +E+   I 
Sbjct: 441 SAGNELLTLINEILDISRLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFIQ 500

Query: 394 PKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIG 453
           P++PR + GDP R++Q L +L+ N++K T+ G + + V +   R +   L+  V+D+G  
Sbjct: 501 PQVPRVISGDPTRLRQALLSLLENALKKTDEGEVLIVVALDE-RSNQPRLRIAVQDSGTP 559

Query: 454 ISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFT 513
           +   ++  L  A   +   +S    G  LGLVI ++L+  M GE  + S  +QGST W T
Sbjct: 560 MDAEERDTLMHAELHSKNFLSATRLGGNLGLVIARQLIILMHGEFGIKSGSNQGSTLWLT 619

Query: 514 LRLHTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPE---- 569
           L L    L          L    +L+++ N     ++ Q     GL V   SA+P     
Sbjct: 620 LPLDPDRLEHPTADLDGPLQGARVLIVDDNDTCRKVLVQQCSAWGLNV---SAVPSGKEA 676

Query: 570 ------EQHVYDYVLLNLAPSKETNPTLVEL--WVQRALAMTHNVIVGVPSTELALADQL 621
                 + H+ DY  + L        T ++L   ++   ++ H++++ + +       ++
Sbjct: 677 LALLRTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKI 736

Query: 622 MQRYP--VKCISKPLSRKKLLQTLAAQQPQ---------LANTSLPKPQADKLPLCVMAV 670
           + R     + ++KP++   L  TLA +  Q           N   P P        ++  
Sbjct: 737 VARNSGVKRILAKPVAGYTLKTTLADELNQRNRGQATNVQVNAGPPLPVKVPSDFRILVA 796

Query: 671 DDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAI 730
           +DN  + K+I  +L +      + ++G+EA++  + +++D++LMD +MP +DG +A + +
Sbjct: 797 EDNSISTKVIRGMLGKLNLQPDTASNGEEALKAMKEQRYDLVLMDCEMPILDGFSATQQL 856

Query: 731 K--QLKGYRD-TPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHW 781
           +  ++   R  TPV+A+TAH +A  ++R  +AGMD ++ KP+E   L++++ HW
Sbjct: 857 RAWEMGNQRTRTPVVALTAHILAEHKERARQAGMDGHMAKPVELSQLRELIEHW 910