Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  278 bits (712), Expect = 7e-79
 Identities = 189/555 (34%), Positives = 289/555 (52%), Gaps = 44/555 (7%)

Query: 245 LSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRT 304
           L+EY  ++++ +   T++L+ +  +L   N EL++A++ A + A  +S FLANMSHE+RT
Sbjct: 246 LTEYLAQLENIVSARTAELKASNARLSQSNEELEVARRTALDMAEARSAFLANMSHEIRT 305

Query: 305 PLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPF 364
           PLNG++G     L   LT  Q   L     S   L+ ++NDILD SK +AG+L LE IPF
Sbjct: 306 PLNGLLGMIALSLDGPLTAEQQQQLSIAHDSGKVLVELLNDILDLSKFDAGQLELERIPF 365

Query: 365 EFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTER 424
           +   ++E+  NL + +A    +E+   I P+ P  V+GDP R++Q+++NL+ N++KFT  
Sbjct: 366 DLGSLVEDTANLLSQNA-APSVELACLIKPQFPAQVLGDPTRVRQIVSNLLSNALKFTRF 424

Query: 425 GNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGL 484
           G +DV      L      ++  V DTGIGI +  QA++ Q F+QA A I+R++GGTGLGL
Sbjct: 425 GRVDVK-----LSHYEGGVRIEVCDTGIGIPQEAQARILQPFTQAGAGITRQFGGTGLGL 479

Query: 485 VITQKLVSHMGGEISLTSRLHQGSTFWFTLRL--HTTELPLNDGYNADSLNHRHLLLIEP 542
            +T  L   M G ++++S    GS F   L L  H    P+      + L    + +   
Sbjct: 480 ALTYNLCEAMQGRLTISSEAGFGSQFCADLPLPCHLPATPV------EPLRGNVVAITAS 533

Query: 543 NMQAAAIVQQTLVQSGLEVTYRS------AIPEEQHVYD--YVLLNLAPSKETNPTLVEL 594
           +   A ++   L   GL+   RS       +  +  + D    L NL P+ +    LV  
Sbjct: 534 SSGLAELLGMLLPGWGLDYVQRSIDDGLLGLKPDMLITDCPECLFNLRPTFDAPILLVTA 593

Query: 595 WVQRALAMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQTLAAQQPQLANTS 654
           +              +PS E A    L+Q+      ++PL+R  L Q L  +  Q   T 
Sbjct: 594 YGS-----------FMPSEEAAALAPLIQQ------ARPLARLALYQIL-RRAMQSEATV 635

Query: 655 LPKPQADKLPLC----VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFD 710
           +   Q + L       V+ V+DNP N  +   +L +    V     G EA+ Q + R FD
Sbjct: 636 IDDAQIETLAPSRRGRVLLVEDNPVNQLVAKGMLVKLGCEVTVAAHGAEALSQLEQRVFD 695

Query: 711 IILMDIQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIE 770
           ++LMD  MP MDG  A + I+Q   + D P++A+TA+AM  ER+R   AGM+DYL+KP  
Sbjct: 696 LVLMDCNMPVMDGYEASRQIRQSGRWSDLPIVALTANAMPEERERCRAAGMNDYLSKPFR 755

Query: 771 EHILQQVLVHWSPHT 785
              L  VL  W P T
Sbjct: 756 REELAAVLDQWVPTT 770