Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 948 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  247 bits (630), Expect = 3e-69
 Identities = 164/556 (29%), Positives = 296/556 (53%), Gaps = 31/556 (5%)

Query: 263 LRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLT 322
           L E   QL+  +     A+       + K++FL+ +SHELRTP+NGV+G +  +L T L+
Sbjct: 398 LLERQRQLQSDSRTQYTAEAVTSAELKTKADFLSKISHELRTPMNGVLGMSELLLGTSLS 457

Query: 323 NSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAH 382
             Q DY+QTI  S N LL +IN+ILD SKLE+G++ L+++ F+F  ++E+ +++    A 
Sbjct: 458 AKQRDYVQTIHSSGNELLNLINEILDISKLESGQIELDDVQFDFNALIEDCLSIFRAKAE 517

Query: 383 EKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVID 442
           ++ +E+   I P++P+ V GDP R++Q L NL+ N+ K T+ G + +   +   +D+   
Sbjct: 518 QQKVELISFIQPQLPQVVAGDPTRLRQTLLNLLENAFKQTDEGEVLLIAAVDGPQDNP-R 576

Query: 443 LQFMVRDTGIGISE-RQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLT 501
           L+  V+D+G  +    + A L  A    D   S R+GG  LGL+I ++LV  M G+  + 
Sbjct: 577 LRITVQDSGRPLEPYERDALLNAAVDSHDFLASTRHGGR-LGLIIARQLVQLMDGDFGIQ 635

Query: 502 SRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEV 561
           +   QG+T W +L L +  L  N+      L    LL+++ N     ++ Q     GLEV
Sbjct: 636 TGTTQGNTLWISLPLASEGLAQNNADLDGPLQGTRLLIVDDNDTCRKVLVQQCSAWGLEV 695

Query: 562 TYRSAIPEE----------QHVYDYVLLNLAPSKETNPTLVELWVQRALAMTHNVIVGVP 611
           +  ++  E           +  +D VLL+      T   L    ++   ++ H++++ + 
Sbjct: 696 SAVASGKEALALLRTKAHLREYFDVVLLDQDMPGMTGMQLASK-IKEDSSLNHDILLIML 754

Query: 612 STELALADQLMQRYP--VKCISKPLSRKKLLQTLAAQQPQLANTSLPKPQADKLPLC--- 666
           +   +   +++ R     + ++KP++   L  TLA +  Q   +S  +P     PL    
Sbjct: 755 TGMGSAPSKIIARNAGIKRILAKPVAGYTLKTTLADELAQRLQSSQLRPALASPPLAPLE 814

Query: 667 ------VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPH 720
                 ++  +DN  + K+I  +L +      +  +G+EA+E  +++ +D++LMD +MP 
Sbjct: 815 VPSDFRILVAEDNNISTKVIRGMLNKLNLQPDTACNGEEALEAIKTQPYDLVLMDCEMPV 874

Query: 721 MDGVTACKAIKQLK---GYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQV 777
           +DG  A + +++ +   G   TPV+A+TAH ++  R+R  +AGMD ++ KP+E   L+++
Sbjct: 875 LDGFQATQQLREWEARNGRSRTPVVALTAHILSEHRERAREAGMDGHMAKPVELSHLREL 934

Query: 778 LVHWSPHTRSKQVAKV 793
           + HW    R KQ   V
Sbjct: 935 IDHW---VRVKQAESV 947