Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 914 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  274 bits (701), Expect = 2e-77
 Identities = 182/519 (35%), Positives = 285/519 (54%), Gaps = 31/519 (5%)

Query: 280 AKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNL 339
           A +RA      KS FLA MSHE+RTPLNGV+G  + + +T L  SQ  YL TI  S N+L
Sbjct: 398 AAERAASENEAKSRFLAKMSHEIRTPLNGVLGMLQLLRETPLDRSQQFYLDTISSSGNSL 457

Query: 340 LTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRG 399
           + +INDILD++++ +GKL+LE+I F+ + ++ E + L    + EK L + + ++P +PR 
Sbjct: 458 MAVINDILDYARIGSGKLSLEDIDFDLEILISETIRLFTAQSLEKQLSLHVGLEPGVPRR 517

Query: 400 VVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQ 459
           + GDP R++Q+L NL+ N++KFTE G++ + V  R   D    L F V D+GIG+ +   
Sbjct: 518 IRGDPTRLKQILMNLLSNALKFTEHGHVLLEVSCRQTPDGGPRLVFCVSDSGIGMRQEVL 577

Query: 460 AQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHT- 518
           AQLF++FSQ D+S +RRYGG+GLGL I+++LV  M G I + S   +GS F F + L T 
Sbjct: 578 AQLFESFSQGDSSTTRRYGGSGLGLAISKELVEMMNGHIEVQSAPGRGSRFCFEIPLRTA 637

Query: 519 --TELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPEE--QHVY 574
              E PL        L  R  LL   + Q    +   L + G+  T R   P+    ++ 
Sbjct: 638 TDVEDPL-----TQLLAGRPALLASQDAQGLEALSHLLRRWGMR-TERCLTPDRLPDYLA 691

Query: 575 DY----VLLNLAPSKETNPTLVE-----LWVQRALAMTHNVIVGVPSTELALADQLMQRY 625
           D+    +L+ LAP   +    +E     L   + + M ++ I   P       D  +   
Sbjct: 692 DFTAPPLLVLLAPWPGSPSQWLERLRPYLEANQRMLMLYSPIHEPPP---LTPDLRLISL 748

Query: 626 PVKCISKPLSRKKLLQTLAAQQP-QLANTSLPKPQADKLPLCVMAVDDNPANLKLITALL 684
            +   S PL  ++ LQ L  ++P Q A T        +   C++  +DNP N  ++  LL
Sbjct: 749 ALPLQSAPL--REALQALYEREPAQSAETDKASIAPLQSEPCILVAEDNPVNQMVVRGLL 806

Query: 685 QERVEYVVSCTSGQEAIE--QAQSRQFDIILMDIQMPHMDGVTACKAIKQLKG---YRDT 739
           ++R   V    +G++A++  +       +ILMD +MP +DG  A + I++L+     +  
Sbjct: 807 KKRGYAVQLADNGRQAVDLYRRDPDAVQLILMDCEMPELDGFEASRQIRKLEADQQLQAV 866

Query: 740 PVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVL 778
           P+IAVTAH +A  R R L++GMD+++ KP+E   L   L
Sbjct: 867 PIIAVTAHVLAEHRQRGLESGMDEFIGKPLESRQLYACL 905