Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  523 bits (1348), Expect = e-152
 Identities = 330/932 (35%), Positives = 511/932 (54%), Gaps = 42/932 (4%)

Query: 1   MTQRYGLRARVMTLTLAPTLIIGLLLSALFSFNRYHDLETQVINSGASIIEPLAIASEDA 60
           M +  G+R RV+ LTL P+ ++ ++L A F++ +  ++  Q+   G  I E LA  +  A
Sbjct: 1   MLKDLGIRGRVLMLTLLPSTLLAVVLGAYFTWMQLSEMRHQLDERGQLIAEQLAPLAAPA 60

Query: 61  LRMQSRESVRRIISYAHRKNSKLVRSIAVFDANHELFVTSNFHPNFEKLMYPKDKPIPFL 120
           + +   + ++RI++    +    VR++ + D           H     L  P       L
Sbjct: 61  MNLGYDKRLQRILTQVLDQAD--VRAVTILDPER----VQRVHAGPRMLTPPPPGDPEGL 114

Query: 121 SSSVIDENTLILRTPIISERTVLDNGDANPATPVMGYIAIELDLSSLRLQQYQEIFSAGL 180
           +     ++T IL  P++S    L +    P   ++G++ +EL   +  L+ Y+ + ++  
Sbjct: 115 TRVSSMDHTRILM-PVLSRHLNLADEARGPDEKLIGWLELELSHHNTLLRGYRSLLTSLF 173

Query: 181 VLVIGILLSGVFASRLMYDVTRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKKGINA 240
           ++  G++++ + A R+   ++ P+  +K  V +++ GHL+ R+      E+D L  GIN 
Sbjct: 174 LVSAGLIITALLALRMSRAISLPLQRVKAAVAQLKDGHLETRLPPLGSHEMDELASGINR 233

Query: 241 MAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSH 300
           MA +L     E+Q SIDQAT D+++ LE +EIQN+ELD+A+K A EA+R+KSEFLANMSH
Sbjct: 234 MAEALLSAREELQQSIDQATEDVQQNLETIEIQNIELDLARKEALEASRIKSEFLANMSH 293

Query: 301 ELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALE 360
           E+RTPLNG++GFT+ + K+ LT  Q DYL TIEKSA++LL IIN+ILDFSK+EAGKL L+
Sbjct: 294 EIRTPLNGILGFTQLLQKSDLTPRQQDYLGTIEKSADSLLGIINEILDFSKIEAGKLVLD 353

Query: 361 NIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIK 420
           +IPF  ++++E+ + + A +AH K LE+   +    P  +VGDPLR++QVLTNL+ N+IK
Sbjct: 354 SIPFNLRDLIEDTLTILAPAAHTKQLELVSLVYRDTPLSLVGDPLRLKQVLTNLISNAIK 413

Query: 421 FTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGT 480
           FT  G I V   +     D   L+  V+DTGIG++++    LFQAFSQAD S+SR+ GGT
Sbjct: 414 FTNEGTIAVRAMVEDDNADRAQLRISVQDTGIGLTDQDLRALFQAFSQADNSMSRQPGGT 473

Query: 481 GLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLI 540
           GLGLVI+++L+  MGGEI + S   +GS FW +L L      + D     +L  R + L+
Sbjct: 474 GLGLVISKRLIEQMGGEIGVDSIPDEGSEFWISLSLPKARDDVED-LPHPALQGRRIALL 532

Query: 541 EPNMQAAAIVQQTLVQSGLEVTYRSAIPEEQ----------HVYDYVLLNLAPSKETNPT 590
           E +  A   +Q  L   GLEV     + + Q           + D  +L +  ++E  P 
Sbjct: 533 EQHPLARQALQHQLESLGLEVHTFDTLDQMQAAIGAQRQSSQLIDLAVLGVT-AREIQPE 591

Query: 591 LVELWVQRALAMTHNVIVGVPSTELA-LADQLMQRYP-VKCISKPLSRKKLLQTLAAQQP 648
            +   +    A+    +V  P+TE     D L + +   +   KP   +KL + L     
Sbjct: 592 ALSRRLMEIEALGCKCVVLCPTTEQGHYHDTLPEVHSYTQLQGKPACTRKLQRVLVELVR 651

Query: 649 QLANTSLPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQ 708
                + P   A      V+ VDDNPANL L+  LL +    VV+  +G  A++  +   
Sbjct: 652 PNQTYAAPVAAAPSRAARVLCVDDNPANLLLVKTLLGDMGAEVVAVDNGPAALDAVKQHS 711

Query: 709 FDIILMDIQMPHMDGVTACKAIK---QLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYL 765
           FD++LMD+QMP MDG    +AI+      G    P+IA+TAHA+A E+  LL++GMDDYL
Sbjct: 712 FDLVLMDVQMPGMDGRQTTEAIRHWEHTSGSTPLPIIALTAHALANEKRSLLQSGMDDYL 771

Query: 766 TKPIEEHILQQVLVHWSPHTRSKQVAKVTPPDGAAVISNALPSSPPAEEAIIDWPVALRQ 825
           TKPI +  L QV++ W+      Q     P            S P     ++D    LR 
Sbjct: 772 TKPISDRQLAQVVLKWTGLVLRSQPQHSEP-----------SSQPELSLKVLDKEEGLRL 820

Query: 826 SANKEDLAKEMLGMLVDYLREVETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGVPRLR 885
           +A K DLA +MLGML+  L      +  A +  +  A  L+  +H+LHG+  Y GVP+LR
Sbjct: 821 AAGKADLADDMLGMLLQSLEGDRRTIREARQSGDRQA--LIERVHRLHGATRYCGVPQLR 878

Query: 886 KICASLEQALRNG-----ASIDELEPELFELQ 912
             C   E  L+        ++DEL+  +  L+
Sbjct: 879 NACQQSETLLKQNHPDSETALDELDAAIDRLE 910