Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 929 a.a., Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase from Pseudomonas syringae pv. syringae B728a

 Score =  239 bits (611), Expect = 5e-67
 Identities = 154/530 (29%), Positives = 291/530 (54%), Gaps = 24/530 (4%)

Query: 279 IAKKRAQEAARV--KSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSA 336
           I++ +A   A +  K+EFLA +SHE+RTP+NGV+G T  +L T L+  Q DY+QTI  + 
Sbjct: 383 ISRDQAASTAEINAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIHSAG 442

Query: 337 NNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKI 396
           N LLT+IN+ILD +KLE+G++ L+++ F+   ++E+ +N+    A ++ +E+  +I P++
Sbjct: 443 NELLTLINEILDITKLESGQIELDDVQFDIGALVEDCLNIFRAKAEQQQVELISQIQPQV 502

Query: 397 PRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISE 456
           PR + GDP R++Q L +L+ N++K T+ G I ++V + + +     L+  V+D+G  +S+
Sbjct: 503 PRVINGDPTRLRQTLLSLLENALKKTDEGEILLAVSLESSKSGNTRLRISVQDSGESLSD 562

Query: 457 RQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRL 516
            ++ +L  A   +   ++    G  LGLVI ++L+  M GE  + +   QG+T W  L L
Sbjct: 563 EEREELLHAELHSRNFLASSRLGGHLGLVIARQLIVLMDGEFGIQNTGAQGNTLWLNLPL 622

Query: 517 HTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPE------- 569
               L          L    +L+++ N     ++ Q     GL V+  ++  E       
Sbjct: 623 DAKLLEQPTIDLDSPLKDARVLVVDDNDTCRKVLVQQCSAWGLNVSAVASGKEALALLRT 682

Query: 570 EQHVYDYVLLNLAPSKETNPTLVEL--WVQRALAMTHNVIVGVPSTELALADQLMQRYP- 626
           + H+ DY  + L        T ++L   ++   ++ H++++ + +       +++ R   
Sbjct: 683 KAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIARNSG 742

Query: 627 -VKCISKPLSRKKLLQTLAAQQPQLANTSLP-KPQADKLP-------LCVMAVDDNPANL 677
             + ++KP++   L  TLA +  QL    +  KP     P         ++  +DN  + 
Sbjct: 743 IKRILAKPVAGYTLKTTLADELTQLNKGVVSNKPGPVVTPPVNVPGDFRILVAEDNSIST 802

Query: 678 KLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIK--QLKG 735
           K+I  +L +      + ++G+EA+   +++++D++LMD +MP +DG +A + ++  ++  
Sbjct: 803 KVIRGMLGKLNLNPDTASNGEEALRAMKAQRYDLVLMDCEMPILDGFSATEQLRAWEVGN 862

Query: 736 YR-DTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHWSPH 784
            R  TPV+A+TAH +   +DR  +AGMD ++ KPIE   L++++ HW  H
Sbjct: 863 QRVRTPVVALTAHILTEHKDRARQAGMDGHMAKPIELSQLRELVEHWVAH 912