Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 950 a.a., ATP-binding protein from Synechocystis sp000284455 PCC 6803

 Score =  244 bits (622), Expect = 2e-68
 Identities = 160/442 (36%), Positives = 232/442 (52%), Gaps = 35/442 (7%)

Query: 231 LDTLKKGINAMAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARV 290
           L  L +G       L E  + ++H  ++    ++E  ++LE     L  AK  A+ A + 
Sbjct: 398 LPLLSRGTIQDVTELQEAQISLEHLNEKLEQRIQERTQELENSQESLLEAKLVAEGATKA 457

Query: 291 KSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFS 350
           KSEFLANMSHE+RTP+N +IG +  +L+T LT+ Q +YLQ ++ +   LL IIN+ILDFS
Sbjct: 458 KSEFLANMSHEIRTPMNAIIGMSELVLQTDLTSQQRNYLQKVQYAGELLLGIINNILDFS 517

Query: 351 KLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQV 410
           K+EAGKL LE  PF  +EV+  + ++    A  KGL +   +DP+IP  +VGD LR+ Q+
Sbjct: 518 KMEAGKLELEQKPFSVEEVMGNLHSILGIQAEAKGLTLNFHLDPRIPPILVGDRLRLSQI 577

Query: 411 LTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQAD 470
           L NL  N++KFT +G I +  ++    ++   LQF V DTGIG++  QQ++LFQ F+Q +
Sbjct: 578 LINLGNNAVKFTNQGEITIRGQLLKTENEQTKLQFSVTDTGIGLTPDQQSKLFQWFNQGE 637

Query: 471 ASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNAD 530
            S SR+YGGTGLGL I++ L   MGG+I L S + QGSTF FT+ L T    +   Y   
Sbjct: 638 TSTSRQYGGTGLGLAISKSLTELMGGDIWLESVVGQGSTFHFTVCLGTASPAVAQDYLVS 697

Query: 531 ----------------SLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPE----- 569
                            L    +LL+E N          L   GL V   +   E     
Sbjct: 698 RVSILEAKPSVTQAITQLEGASILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLL 757

Query: 570 EQHVYDYVLLNLAPSKETNPTLVELWVQR-------ALAMTHNVIVGVPSTELALADQLM 622
             + YD +L+++               Q+        +AMT N + G    E AL D  M
Sbjct: 758 TSNTYDAILMDIQMPMLNGYDATRAIRQQEYHRNLPIIAMTANAMAG--DQEKAL-DAGM 814

Query: 623 QRYPVKCISKPLSRKKLLQTLA 644
             +    ++KP+    L QTLA
Sbjct: 815 NDH----LTKPIKPDLLFQTLA 832



 Score =  105 bits (262), Expect = 1e-26
 Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 11/242 (4%)

Query: 667 VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTA 726
           ++ V+DN  N +    LL  +   V    +GQEA+    S  +D ILMDIQMP ++G  A
Sbjct: 720 ILLVEDNEINREFAHDLLTSKGLRVQVANNGQEALTLLTSNTYDAILMDIQMPMLNGYDA 779

Query: 727 CKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTR 786
            +AI+Q + +R+ P+IA+TA+AMAG++++ L AGM+D+LTKPI+  +L Q L HW P   
Sbjct: 780 TRAIRQQEYHRNLPIIAMTANAMAGDQEKALDAGMNDHLTKPIKPDLLFQTLAHWIPPNS 839

Query: 787 SKQVAKVTPPDGAAVISNALPSSPPAEEAIIDWPVALRQSANKEDLAKEMLGMLVDYLRE 846
           +++  K  P       SN       +    I+  + ++   N E L   +L    D    
Sbjct: 840 ARE--KKNPS------SNLKADLSFSSMTGINQQIGMQYIENVE-LYHRLLVKFGDRYSN 890

Query: 847 VETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQALRNGASIDELEP 906
                 T    ++  A+    + H + G+ +  G+  +      LE + R   S + ++ 
Sbjct: 891 FADQFRTEQASDDPTAA--TRYAHSIKGAAALLGIENVHHTAQQLEDSCREHESPEMIDR 948

Query: 907 EL 908
            L
Sbjct: 949 HL 950