Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 1453 a.a., response regulator from Synechocystis sp000284455 PCC 6803

 Score =  316 bits (810), Expect = 6e-90
 Identities = 237/690 (34%), Positives = 360/690 (52%), Gaps = 66/690 (9%)

Query: 264  RETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTN 323
            RE   +L  +N+EL+ A   A+ A R K EFLA MSHE+RTP+NGVIG T  ++ T L  
Sbjct: 742  RERRRELAQKNLELEKATWAAEAANRAKGEFLAMMSHEIRTPMNGVIGMTELLIMTDLNL 801

Query: 324  SQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHE 383
             Q DY+QTI +S   LLTIINDILDFSK+EA KL LE   FE + ++E V+ +    A  
Sbjct: 802  QQLDYVQTIRQSGETLLTIINDILDFSKIEADKLVLETQAFELRPLIETVLEMFGPIARA 861

Query: 384  KGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRAL-----RD 438
            K LE+T  IDP+ P  ++GD +R++Q+L+NL+GN++KFTE+G + ++V+           
Sbjct: 862  KHLELTYGIDPQTPARILGDQVRLRQILSNLIGNALKFTEKGEVVLTVKGEPFDPAESYH 921

Query: 439  DVIDLQ-------FMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLV 491
             +++L        F +RDTGIGI   +Q +LF++FSQ D+S +R+YGGTGLGLVI+Q+L 
Sbjct: 922  TILNLPHPSHRICFNLRDTGIGIPLDRQDRLFKSFSQVDSSTTRKYGGTGLGLVISQRLT 981

Query: 492  SHMGGEISLTSRLHQGSTFWFTLRLHTTELP-LNDGYNADSLNHRHLLLIEPNMQAAAIV 550
              MGG +++TS    GS F F + L T + P L +  +   +  + +L+++ N     I+
Sbjct: 982  QMMGGVLTVTSEPGVGSNFRFCI-LTTAQAPALAEADSVQQMKGKQVLIVDDNETNRRIL 1040

Query: 551  QQTLVQSGL----------EVTYRSAIPEEQHVYDYVLLNLAPSKETNPTLVELWVQRAL 600
            Q      GL           + + +  P+     D  +L+L        TL     Q A 
Sbjct: 1041 QDQCQAWGLVCHCFTSGESALDWFARCPD----LDAAILDLQMPNMDGITLAHHLRQFAQ 1096

Query: 601  AMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQT----------LAAQQPQL 650
                 +I+ + S  +A AD+L     V  ++KP+ +  +  +          LA   PQ 
Sbjct: 1097 GKDLPIIL-LSSGLVAGADELSVFQTV--LNKPVRQSLIFDSLVNIFQGSIGLADYAPQF 1153

Query: 651  ANTSLPK--PQADKLP-----------LCVMAVDDNPANLKLITALLQERVEYVVSCTSG 697
                LP+  P  D LP           L ++  +DN  N K+   +L      V    +G
Sbjct: 1154 DQLDLPEFVPDGDGLPTEDNATSLQPALQILLAEDNLVNQKVAHQMLNNLGYPVAIANNG 1213

Query: 698  QEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQ-LKGYRDTPVIAVTAHAMAGERDRL 756
            QE I+  + + +D++LMD+QMP MDG+TAC+ I+Q L   R   ++A+TA+AM G+R   
Sbjct: 1214 QEVIDALEKKFYDLVLMDMQMPVMDGITACRHIRQTLPLERQPRIVAMTANAMPGDRQEC 1273

Query: 757  LKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQVAK--VTPPDGAAVISNALPSSP-PAE 813
            L AGMD Y++KPI  + L++VL   S    S Q  +  VT  D   V+       P    
Sbjct: 1274 LDAGMDGYISKPISINQLRKVLQDTSALITSPQAREDIVTLGDKITVVEEQTMVKPTDVT 1333

Query: 814  EAIIDWPVA---LRQSANKEDLAKEMLG-MLVDYLREVETVVNTALEDEEYPASDLLHH- 868
            E+ +D P A   LR      DL   + G M+  Y +E + ++   ++  E     ++   
Sbjct: 1334 ESPLD-PTAIAFLRDDLCGGDLT--LFGEMVACYCQESQKLIEELVQGLEVDDFAVIRRT 1390

Query: 869  IHKLHGSCSYSGVPRLRKICASLEQALRNG 898
             H L  S +  G  +L   C  LE+   +G
Sbjct: 1391 AHSLKSSSASLGAQQLSTFCQQLEKNAGSG 1420