Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 1560 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  302 bits (773), Expect = 1e-85
 Identities = 219/676 (32%), Positives = 344/676 (50%), Gaps = 38/676 (5%)

Query: 277  LDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSA 336
            L +AK+ A+EA+ VK +FLANMSHE+RTP+N ++G    + +T LT  QADY+     +A
Sbjct: 882  LVLAKQAAEEASVVKGQFLANMSHEIRTPMNAILGMLTLVQRTALTPHQADYVCKAHSAA 941

Query: 337  NNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKI 396
             +LL ++NDILDFSK+EAGKL LE  PF  + VL ++  + + S  +KG+E+   I P +
Sbjct: 942  GSLLGLLNDILDFSKIEAGKLHLEPHPFRLETVLRDLAVVLSGSYGDKGVEVLFDIAPHL 1001

Query: 397  PRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISE 456
            P   +GD LR++QVL NL GN++KFT++G + VSV + A  DD + ++  V DTGIGI+ 
Sbjct: 1002 PDSFIGDDLRLRQVLLNLAGNALKFTDQGQVIVSVGVLAREDDRLTMRMAVSDTGIGIAA 1061

Query: 457  RQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRL 516
             Q A +F AF QA+ S +RR+GG+GLGL IT+ LV  MGG + + S+  +GS FWF + L
Sbjct: 1062 DQLASIFGAFEQAETSTTRRFGGSGLGLTITRHLVERMGGVLRVESQPGRGSRFWFDITL 1121

Query: 517  HTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQT---------LVQSGLEVTYR-SA 566
              +        +A+S     +L++E N  A  I+ QT         LVQ   E   R  A
Sbjct: 1122 PVSG---EGSESAESGRPLRVLVVEDNPVAGGILAQTVQGLGYDCDLVQESAETKARIVA 1178

Query: 567  IPEEQHVYDYVLLNLAPSKETNPTLVELWVQRALAMTHNVIVGVPS---TELALADQLMQ 623
                   YD VLL+    +    T   +  +  + +    I+ V +     L+LA+Q   
Sbjct: 1179 ADAAGRPYDAVLLDWRMPEVDGLTTARILREMGVTLCPQSIIMVTAYGRDVLSLAEQTGD 1238

Query: 624  RYPVKCISKPLS----RKKLLQ----TLAAQQPQLANTSLPKPQADKLPLCVMAVDDNPA 675
                  ++KP++    R  LL+    T   +   LA   LP P A +    ++ V+DN  
Sbjct: 1239 APFDAVLTKPVTPGQLRDALLRRDRATSEGEATALAPRGLPTPLAGRR---LLVVEDNAI 1295

Query: 676  NLKLITALLQERVEYVVSCTSGQEAIEQAQSRQ--FDIILMDIQMPHMDGVTACKAIKQL 733
            N ++   LL      +     G+  +      +  +D +LMDIQMP +DG  A + I+  
Sbjct: 1296 NRQVAAELLAGAGAEIDLAEGGERGVMMVLRGEIAYDAVLMDIQMPDIDGFEATRRIRAD 1355

Query: 734  KGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQVAKV 793
              ++  P++A+TA+A   +R+  L AGM +++ KPI+      VLV       + +   +
Sbjct: 1356 ARFKALPIVAMTANASRADREACLAAGMTEHVGKPIDITATIDVLVSLMTEGMT-EGEPI 1414

Query: 794  TPPDGAAVISNALPSSPPAEEAIIDWPVALRQSANKEDLAKEMLGMLVDYLREVETVVNT 853
             PP         +PS  P  E   D      +   + DL + +L    +   E+   +  
Sbjct: 1415 APPSPMGGTGREVPSDEPLLE---DLDSIAERLGGQVDLLRRLLPTFAERTGELLDEIED 1471

Query: 854  ALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQALRNG--ASIDELEPELFEL 911
             +   ++ A  +    H + GS +  G   L    A  E+ LR     ++D L  +   L
Sbjct: 1472 LIGRGDWSALSMA--FHTIKGSAASMGAVALASHAALWEERLREDGPGTLDALRRDQ-AL 1528

Query: 912  QDEMAKVLEASRDYLN 927
             D+M  +L AS + L+
Sbjct: 1529 CDQMRALLAASLEALS 1544