Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 759 a.a., putative two-component sensor histidine kinase/response regulator hybrid protein from Phaeobacter inhibens DSM 17395

 Score =  290 bits (741), Expect = 3e-82
 Identities = 199/579 (34%), Positives = 306/579 (52%), Gaps = 30/579 (5%)

Query: 227 MHGELDTLKKGINAMAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQE 286
           +H  +     G++ +   L  +      +++ +   L +T  + + +   L+ A+K A  
Sbjct: 176 IHQRMSGAIAGLSGLQARLPWFASREFRALNFSVGVLEDTFSERDEREYALEEARKAADI 235

Query: 287 AARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDI 346
           A R KSEFLANMSHE+RTP+NGVIG    +L+T L   Q  Y +TI KS + LLTIINDI
Sbjct: 236 ANRAKSEFLANMSHEIRTPMNGVIGMAELILETDLDEDQTMYAETISKSGSALLTIINDI 295

Query: 347 LDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLR 406
           L+FSK+EAGK+ LE  PF  Q  +E+VV L +  A EK +E+TL+ DP +P    GD  R
Sbjct: 296 LNFSKIEAGKMELERAPFNLQTAIEDVVTLLSPKAAEKNVEVTLRYDPSLPECYEGDVGR 355

Query: 407 IQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAF 466
           I+Q+LTN+ GN++KFT +G + + V      DD   L+  V DTG GI E +  ++F AF
Sbjct: 356 IRQILTNVAGNAVKFTGKGYVYIEVSGET-DDDRTALRISVTDTGAGIPEDRLDRIFNAF 414

Query: 467 SQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDG 526
            QAD + +R Y GTGLGL I+ +L+  MGG IS+ S L +GS F   L L          
Sbjct: 415 EQADGAATRNYEGTGLGLAISTRLLELMGGRISVQSELGKGSVFAIDLPLRIRPSQPKRA 474

Query: 527 YNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLE-VTYRSA------IPEEQH---VYDY 576
            +A        L+++       I+ + L   G++ V   SA      + + +H    YD 
Sbjct: 475 QDARDFKGLRALVVDDLELNRIILTERLATWGVQSVAAGSAHQALELLLDSRHDGTHYDV 534

Query: 577 VLLNL----APSKETNPTLVELWVQRALAMTHNVIVGVPSTELALADQLMQRYPVKCISK 632
           +L +        KE    + ++   R L +   ++  V +T    A + + R  V    K
Sbjct: 535 ILQDFQMPGMDGKELAERIRDIPEYRDLPIV--ILSSVENTIDREAREHLGRCEVAL--K 590

Query: 633 PLSRKKLLQTLAAQQPQLANTSLPK---PQADKLPLC----VMAVDDNPANLKLITALLQ 685
           PL R   LQ++ ++  + A    P+   PQ  +  +     ++  +DN  N  +++ +L+
Sbjct: 591 PL-RAAQLQSVMSRVLETATEEAPQAVPPQGVETSVVPEVKLLLAEDNRTNQLVVSRMLK 649

Query: 686 ERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLK---GYRDTPVI 742
                V+   +G+EA+   Q    DI+LMD+ MP  DG+ A   I+QL+   G    PV+
Sbjct: 650 AAPIEVLIAANGEEAVTMFQEHHPDIVLMDMMMPVKDGIDATAEIRQLEKDNGLGRCPVV 709

Query: 743 AVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHW 781
           A+TA+A+   R+  L AGMDD+L+KPI +  L   +  W
Sbjct: 710 ALTANALQSHREECLAAGMDDFLSKPINKKALLGAVGKW 748



 Score = 54.3 bits (129), Expect = 3e-11
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 6/139 (4%)

Query: 665 LCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIE-----QAQSRQFDIILMDIQMP 719
           L  + VDD   N  ++T  L       V+  S  +A+E     +     +D+IL D QMP
Sbjct: 483 LRALVVDDLELNRIILTERLATWGVQSVAAGSAHQALELLLDSRHDGTHYDVILQDFQMP 542

Query: 720 HMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLV 779
            MDG    + I+ +  YRD P++ +++     +R+     G  +   KP+    LQ V+ 
Sbjct: 543 GMDGKELAERIRDIPEYRDLPIVILSSVENTIDREAREHLGRCEVALKPLRAAQLQSVMS 602

Query: 780 HWSPHTRSKQVAKVTPPDG 798
                T +++  +  PP G
Sbjct: 603 R-VLETATEEAPQAVPPQG 620