Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 754 a.a., signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  223 bits (569), Expect = 3e-62
 Identities = 125/285 (43%), Positives = 180/285 (63%), Gaps = 7/285 (2%)

Query: 276 ELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKS 335
           +L  A+  A+E ARVKSEFLA MSHE+RTP+NGVIG  + + +TQL   Q  Y  TI  S
Sbjct: 365 QLKDARIAAEEGARVKSEFLATMSHEIRTPMNGVIGMAQMLERTQLDEEQKLYADTILGS 424

Query: 336 ANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPK 395
           A  LL++IND+LD SK++AG++ L  + F+     ++ + L    A EKG+ + L I P 
Sbjct: 425 ARTLLSLINDVLDLSKMDAGEVILSEVDFDLPACFQQTLQLFEPQAQEKGITLDLNIAPD 484

Query: 396 IPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGIS 455
           +PR + GD  R++QVL NLVGN++KFT+ G + V+V    +  D + L+F V DTGIGI+
Sbjct: 485 VPRIINGDDRRLRQVLLNLVGNAVKFTDTGGVGVAVTTSRV-GDRLRLRFSVTDTGIGIA 543

Query: 456 ERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLR 515
           + +Q Q+F+ FSQADA+I+RR+GGTGLGL I++ L   MGGEI +TS   +GS F   LR
Sbjct: 544 KEKQDQIFERFSQADAAITRRFGGTGLGLTISRLLCEAMGGEIDVTSDPGKGSCFSVHLR 603

Query: 516 L------HTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTL 554
           +      +  E+  +      SL    +L+ E N     +V++ L
Sbjct: 604 MQPATGANLAEVAASAQQAGRSLEGMRILVAEDNRINRLLVEKYL 648



 Score = 73.6 bits (179), Expect = 5e-17
 Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 1/112 (0%)

Query: 667 VMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTA 726
           ++  +DN  N  L+   LQ+    +     G EA+E+      D+ILMD+ MP M+G+ A
Sbjct: 631 ILVAEDNRINRLLVEKYLQDEPVTLEFAVDGAEALEKTPDFAPDVILMDMSMPVMNGLDA 690

Query: 727 CKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVL 778
            + I+++   R   + A+TA+A   +R+  LKAGMDD+L+KPI    L  VL
Sbjct: 691 TRNIREM-DIRQPVIAALTANAFDSDREACLKAGMDDFLSKPINRDDLLAVL 741