Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  273 bits (697), Expect = 4e-77
 Identities = 194/584 (33%), Positives = 301/584 (51%), Gaps = 55/584 (9%)

Query: 262 DLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQL 321
           D+  T++  E    EL  A++RA+ A R KS FLANMSHE+RTP+NGV+G    +  T L
Sbjct: 191 DITSTVQYEE----ELQAARERAEAANRAKSAFLANMSHEIRTPMNGVVGMAELLSDTNL 246

Query: 322 TNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSA 381
           ++ Q  Y  TI+ S   LL IIND+LD+SK+EA KL L   PF+ +  + EV+ L   +A
Sbjct: 247 SDEQQLYANTIKNSGEALLVIINDVLDYSKIEAQKLELHPEPFDLERSVHEVLMLLQPTA 306

Query: 382 HEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVE-MRALRDDV 440
            +KGL + L  D  +P   VGDP RI+QVLTNLVGN++KFT  G++ + +  +    D +
Sbjct: 307 RDKGLTLLLDYDLFLPTSFVGDPGRIRQVLTNLVGNAVKFTSEGHVALQITGISNAGDKI 366

Query: 441 IDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISL 500
             +   + DTGIGI E +   +F  F+Q +   +R++ GTGLGL I+++L+  MGGEI +
Sbjct: 367 CSIHVTIEDTGIGIPEEKVQDIFGEFNQVEDERNRQFEGTGLGLAISKRLIELMGGEIWV 426

Query: 501 TSRLHQGSTFWFTLRLHTTELPLNDGYNAD----SLNHRHLLLIEPNMQAAAIVQQTLVQ 556
            S+  +GS F F +     ELPL +G +            + +I+       ++ + L  
Sbjct: 427 ESQEGKGSCFGFRM-----ELPLAEGASTSIPTLPKGLCQIAVIDSQSVMRDVLSKQLAM 481

Query: 557 SGLEVT-YRSAIPEEQHVYDYVLLNLAPSKETNPTLVELWVQ-RALAMTHNVIVGVPSTE 614
            GLEVT + +       + D V L +   +  +   VEL  + R+       I+ + S  
Sbjct: 482 LGLEVTVFDNGAAAIAGMPDGVDLVVCDEQLPDQNGVELAQKLRSGPFAQVPILMLSSDP 541

Query: 615 LALADQLMQRYPVKCISKPLSRKKLLQTLA------------------------------ 644
            A ++  +Q      + KP+ R +L Q L                               
Sbjct: 542 TAPSNSDVQSVTDSVLLKPIQRDELFQRLVDLPGGGSATRPSAVPETVVTPPELNSVATH 601

Query: 645 ------AQQPQLANTSLPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQ 698
                 A  P  A T++      +L + V+A +DN  N  +   ++++    +   ++G 
Sbjct: 602 PDPPQPAPAPAAALTAVSTCPTQRL-MRVLAAEDNRTNQLVFRKMVKDLNIDLQFVSNGI 660

Query: 699 EAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKGYRD--TPVIAVTAHAMAGERDRL 756
           EA+E  QS Q D+I MDI MP MDG  A + I+ L+      TPV+A+TAHAMAG+ D +
Sbjct: 661 EAVEVYQSFQPDLIFMDISMPVMDGKEATQKIRALEHGTGIYTPVVALTAHAMAGDSDGI 720

Query: 757 LKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQVAKVTPPDGAA 800
           L AG+D YLTKP+ + ++ + +  + P   +    +     GAA
Sbjct: 721 LAAGLDHYLTKPLRKALIHERIHAYLPAEAAPLTHETITQTGAA 764