Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 931 a.a., signal transduction histidine kinase from Dechlorosoma suillum PS

 Score =  320 bits (820), Expect = 3e-91
 Identities = 253/796 (31%), Positives = 397/796 (49%), Gaps = 88/796 (11%)

Query: 180 LVLVIGILLSGVFASRLMYDVTRPITHMKNMV-DRIRRGHLDVRIEGKMHGELDTLKKGI 238
           LV V+ +L + + A RL + +  P+  ++    D  R     +R+E +  G  D + + I
Sbjct: 161 LVTVLSMLAAVLAARRLQHIIAAPVVRLEQATRDITRHKRFSLRVEREESGSEDEVGRLI 220

Query: 239 NAMAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVE-LDIAKKRAQEAARVKSEFLAN 297
           ++    L+E  +E +   D+  +  RE+LE++     E L  ++  A+EA+RVKS FLA 
Sbjct: 221 DSFNAMLAE--IEQR---DERLARYRESLEEMVASRTEELTHSRDAAEEASRVKSRFLAT 275

Query: 298 MSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKL 357
           MSHE+RTPLNGV+G  R +  T L+  Q    +   +S   LL ++ND+LDFSK+EAGKL
Sbjct: 276 MSHEIRTPLNGVLGMIRLLQTTALSGDQRRMTEAALRSGETLLNVLNDVLDFSKIEAGKL 335

Query: 358 ALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGN 417
            ++ +PF+  + +E    L A +A EKGLE+ + +  ++P  + GDP R++QVL NL+GN
Sbjct: 336 TVDAVPFDLADTVESAALLLAPNAREKGLELAVHLKGELPVTLAGDPNRLKQVLFNLLGN 395

Query: 418 SIKFTERGNIDVSVEM-------RALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQAD 470
           ++KFTE+G + + VE           R DVI L+F VRDTG GI E +Q +LFQA+SQ  
Sbjct: 396 AVKFTEQGEVCLRVERSPGAAGDSRERGDVILLRFTVRDTGPGIPESEQGKLFQAYSQTS 455

Query: 471 A----------SISRRYGGTGLGLVITQKLVSHMGG-EISLTSRLHQGSTFWFTLRLHTT 519
           A          + SRR  GTGLGL I+++LV  MG  +++++SR  +G  F F L  H  
Sbjct: 456 AASQTPAEIEEAASRRAEGTGLGLAISRELVRLMGARDLTVSSRPGEGCEFSFELPFHV- 514

Query: 520 ELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPEEQHVY----- 574
              + D           L+L+EP    A I+Q      GL+       PE + +      
Sbjct: 515 ---VRDNPTGIHYPGFRLVLLEPQPTLALILQDYAQSLGLDCRLARNAPEAERLLGEGAA 571

Query: 575 DYVLLNLAPSKETNPTLVELWVQRA----LAMTHNVIVGVPSTELALADQLMQRYPVKCI 630
             VL +L   +    T  + W +R     +A++     G  + E  LA    QR     +
Sbjct: 572 QAVLADLCYLQLPEATWQD-WHRRCGGVWIALSD---FGASTLEGELAQVFAQR-----L 622

Query: 631 SKPLSRKKLLQTL---------AAQQPQLAN--------TSLPKPQADKLPLCVMAVDDN 673
           SKP+SRK+ ++++          A+ P  A          +   P   +    V+ V+DN
Sbjct: 623 SKPVSRKEFVRSIGQAFMVAPRGAELPPAAGWQGAAWRPAAAAVPNRPRFHGKVLLVEDN 682

Query: 674 PANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQL 733
             N ++   LLQ     V     G+EA+E+   R FD+ILMD QMP MDG+TA + ++Q 
Sbjct: 683 LTNQEVTRGLLQVFGCQVEVANHGREALEKWAERDFDLILMDCQMPVMDGLTASRELRQR 742

Query: 734 K---GYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQV 790
           +   G   T +IA+TA++ A +R R L AGM+ +L KP +E  L  +L  W         
Sbjct: 743 EIQAGRLPTAIIALTANSFAEDRQRCLAAGMNGFLPKPFDELALVALLTDW--------- 793

Query: 791 AKVTPPDGAAVIS-NALPSSPPA---EEAIIDWPVALRQSANKEDLAKEMLGMLVDYLRE 846
             + PP+G A +   A P        + A++D  +A RQ    E  +  +   +  +L +
Sbjct: 794 --LGPPEGGAQVRVQARPEREAGALLDAAVLD-AIAARQEEAGEVRSIFLARFVSTFLAQ 850

Query: 847 VETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQALRNG--ASIDEL 904
               +    +D+   A +     H L  + +  G   L ++ A +E A R G  A +  L
Sbjct: 851 ASQALQNMAQDDLAAAREA---AHSLKSAAASIGARPLSELAARVEAAAREGQAAEVRRL 907

Query: 905 EPELFELQDEMAKVLE 920
              L +L  +    LE
Sbjct: 908 GESLPQLLADTRSALE 923