Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., hybrid sensor histidine kinase/response regulator from Klebsiella michiganensis M5al

 Score =  885 bits (2286), Expect = 0.0
 Identities = 487/921 (52%), Positives = 637/921 (69%), Gaps = 24/921 (2%)

Query: 5   YGLRARVMTLTLAPTLIIGLLLSALFSFNRYHDLETQVINSGASIIEPLAIASEDALRMQ 64
           Y LRAR+M L LAPT++IGLLLS  F  +RY+DL+ Q+ ++GASIIEPLA++SE  + +Q
Sbjct: 4   YSLRARMMILILAPTVLIGLLLSIFFVAHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQ 63

Query: 65  SRESVRRIISYAHRKNSKLVRSIAVFDANHELFVTSNFHPNFEKLMYPKDKPIPFLSSSV 124
           +RES+ ++IS  HR++S +VR+I+++D+++ LFVTSNF  +  +L  PK  P P   S +
Sbjct: 64  NRESIGQLISVLHRRHSDIVRAISIYDSHNRLFVTSNFQLDPGELQLPKGVPFPRRLSVI 123

Query: 125 IDENTLILRTPIISERTVLDNG---DANPATPVMGYIAIELDLSSLRLQQYQEIFSAGLV 181
              + +ILRTPIISE    D     DA     ++GY+A+ELDL S+RLQQY+EIF + ++
Sbjct: 124 RHGDLMILRTPIISESYSPDESPGSDAKMPGNMLGYVALELDLKSVRLQQYKEIFISSVM 183

Query: 182 LVIGILLSGVFASRLMYDVTRPITHMKNMVDRIRRGHLDVRIEGKMHGELDTLKKGINAM 241
           ++  I ++ +F  RLM DVT PI +M N VDRIRRG LD R+EG M GELD LK GIN+M
Sbjct: 184 MLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSM 243

Query: 242 AVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHE 301
           A+SL+ YH EMQH++DQATSDLRETLEQ+EIQNVELD+AKKRAQEAAR+KSEFLANMSHE
Sbjct: 244 AMSLAAYHEEMQHNVDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHE 303

Query: 302 LRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALEN 361
           LRTPLNGVIGFTR  LKT L  +Q D+L TIE+SANNLL IIND+LDFSKLEAGKL LE+
Sbjct: 304 LRTPLNGVIGFTRLTLKTDLNTTQRDHLTTIERSANNLLAIINDVLDFSKLEAGKLILES 363

Query: 362 IPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKF 421
           IPF  +  L+EVV L A SAH+KGLE+TL I   +P  V+GDPLR+QQ++TNL+GN+IKF
Sbjct: 364 IPFLLRTSLDEVVTLLAHSAHDKGLELTLNIKNDVPDNVIGDPLRLQQIITNLMGNAIKF 423

Query: 422 TERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASISRRYGGTG 481
           TE GNIDV VE RA+ +  + ++  + DTGIGI ER Q++LFQAF QADASISRR+GGTG
Sbjct: 424 TEHGNIDVLVEQRAISNSRVQIEVQIHDTGIGIPERDQSRLFQAFRQADASISRRHGGTG 483

Query: 482 LGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDGYNADSLNHRHLLLIE 541
           LGLVITQ+LV  MGG+IS  S+ ++GSTFWF + L      + D      L  + L  IE
Sbjct: 484 LGLVITQRLVKEMGGDISFHSQPNRGSTFWFHISLDLNPNAVPDSVPTQCLAGKKLAYIE 543

Query: 542 PNMQAAAIVQQTLVQSGLEVTY---RSAIPEEQHVYDYVLLNLAPSKETNPTLVELWVQR 598
            N  AA    + L  + LEV Y    +A+P+    YD +L  + P    + +     + R
Sbjct: 544 ANAAAAQSTMELLATTPLEVVYSPTMTALPDAH--YDILLAGI-PVSIRDLSQHRDKLAR 600

Query: 599 ALAMTHNVIVGVPSTELALADQLMQRYPVKCISKPLSRKKLLQTLAAQQPQLANTSLPKP 658
           A  +  ++++ +P      A+ L Q     C+ KPL+  +LL  L A          P  
Sbjct: 601 ASKLADHLVLALPCHAQVSAETLRQDGIAACLLKPLTSTRLLPALTASCHAQPTILPPHA 660

Query: 659 QADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQM 718
            + KLP+ VMAVDDNPANLKLI ALL++ V++V+ C SGQ+A+E+A+  Q D+ILMDIQM
Sbjct: 661 DSKKLPMTVMAVDDNPANLKLIGALLEDLVQHVILCDSGQQAVERARETQQDLILMDIQM 720

Query: 719 PHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVL 778
           P MDG+ AC+ I QL   + TPVIAVTAHA+ G+R++LLKAGM+DYL KPIEE  L  +L
Sbjct: 721 PEMDGIRACELIHQLPHQQQTPVIAVTAHALEGQREKLLKAGMNDYLAKPIEEDKLHSLL 780

Query: 779 VHWSPHTRSKQVAKVTPPDGAAVISNALPSSPPAEEAI-IDWPVALRQSANKEDLAKEML 837
           + + P        K   P  AA      P+ PP    + +DW +ALRQ+A K DLA+EML
Sbjct: 781 LRYQP-------GKAALPQAAAE-----PAEPPINHNVTLDWQLALRQAAMKPDLAREML 828

Query: 838 GMLVDYLREVETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQALRN 897
            ML+ ++ EV   V   L  E+     +L  +HKLHGSCSYSGVPRL+K+C ++E  LR 
Sbjct: 829 QMLLAFMPEVRNKVEEQLVGEQ--PEGVLDLVHKLHGSCSYSGVPRLKKLCHTIESQLRA 886

Query: 898 GASIDELEPELFELQDEMAKV 918
           G + +ELEPE  EL DEM  V
Sbjct: 887 GTAAEELEPEFLELLDEMDNV 907