Pairwise Alignments

Query, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

Subject, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  347 bits (889), Expect = 5e-99
 Identities = 231/683 (33%), Positives = 382/683 (55%), Gaps = 47/683 (6%)

Query: 267  LEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQA 326
            + +L++ + EL +AK+ A  A++ K +FLANMSHE+RTP+N +IG ++  L+T L   Q 
Sbjct: 1016 MTELKLLSDELLVAKEEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQTALDKKQK 1075

Query: 327  DYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGL 386
            +Y++ IE+++ +LL+IINDILDFSK+EAGKL +E++PF+   +LE++ ++ +  A  K L
Sbjct: 1076 NYVEKIERASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTMLEDLSDMFSEKAAHKQL 1135

Query: 387  EITLKIDPKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFM 446
            E+   + P +PR + GD LR+ QVL NL+ N+IKFTERG + +S+ +   ++D + L+F 
Sbjct: 1136 ELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLLSLNLVEQQNDDVVLRFS 1195

Query: 447  VRDTGIGISERQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQ 506
            VRD+GIG++  QQA+LF++FSQAD S +R+YGGTGLGL I ++LV  MGG I + S+   
Sbjct: 1196 VRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGTIGVESQFGH 1255

Query: 507  GSTFWFTLRLHTTELPLNDGYN---ADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEV-T 562
            GSTF+FT++L      ++ G     A  L    +L+ + N  A  I++ TL   G  V T
Sbjct: 1256 GSTFYFTVKLQ-----ISSGQKLTVAQELEGMPILVADDNATARDIMRTTLESMGFRVDT 1310

Query: 563  YRSAIPEE------QHVYDYVLLNLAPSKETNPTLVELWVQRALAMTHNVIVGVPSTELA 616
             RS   EE      Q  Y   L++            +   Q+A      ++V   + +  
Sbjct: 1311 VRSG--EEAVTRCIQQEYAVALIDWKMPNLDGIETAKQIKQQAKKAPRILMVSAHANQDF 1368

Query: 617  LADQLMQRYPVKCISKPLSRKKLLQTL-----------AAQQPQLANTSLPKPQADKLPL 665
            L+ Q+ +      ISKP+S  +LL  +             +Q +  +  L  P   K   
Sbjct: 1369 LS-QIEELGLAGYISKPISASRLLDGIINSLGRAGVLPVRRQSESIDPKLLLPLKGKR-- 1425

Query: 666  CVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVT 725
             ++ V+DN  NL++ T  L++    +   T+GQ A+++ + + FD++LMD QMP MDG  
Sbjct: 1426 -ILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFDLVLMDCQMPVMDGYQ 1484

Query: 726  ACKAIKQLKGYRDTPVIAVTAHAMAGERDRLLKAGMDDYLTKPIEEHILQQVLVHW---- 781
            A +A+++     + PV+A+TA+AMAG+++  L+AGM+D++ KPIE ++L Q L+ +    
Sbjct: 1485 ATQALRKRPELTELPVVAMTANAMAGDKEMCLRAGMNDHIAKPIEVNLLYQTLLKYLGGS 1544

Query: 782  ---SPHTRSKQVAKVTPPDGAAVISNALPSSPPAEEAIIDWPVALRQSANKEDLAKEMLG 838
                 +T   Q+  + P     + S ++   P   E  ID  + L Q++ +  L +    
Sbjct: 1545 ASLVDNTEPSQLVDI-PVKPINLDSESVVKWPEHPELDIDRGLQLVQNSTR--LYQRSFD 1601

Query: 839  MLVDYLREVETVVNTALEDEEYPASDLLHHIHKLHGSCSYSGVPRLRKICASLEQALRNG 898
              V   R V  ++N AL +++    D +   H L G        +L ++   LE  L   
Sbjct: 1602 RFVTSQRNVVDLINKALANDK--RDDAVRMAHTLKGLAGNLSSSKLVELARQLELHL--- 1656

Query: 899  ASIDELEPELFELQDEMAKVLEA 921
            +   E + EL ++Q  +A + +A
Sbjct: 1657 SEKSEYQTELDQIQALVASICDA 1679