Pairwise Alignments

Query, 440 a.a., 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., tRNA (uracil-5-)-methyltransferase from Dechlorosoma suillum PS

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 19/184 (10%)

Query: 270 FIQVNRAVNQHMVVQALNWLEVSPQERVLDLFCGLGNFTLPLAKQAQAVVGVEGVDEMVQ 329
           F Q N  VN+ M+  A         + +L+L+CG GNFT+ LA   + V+  E     V 
Sbjct: 184 FSQPNGEVNRQMLAWACAQAATLGGD-LLELYCGNGNFTIALAPHYERVLATEMSKTSVH 242

Query: 330 HATHNAKLNQINNVAFYQANLEQDMTSASWAQQ------------KFAKVLLDPARAGAE 377
            A +N + N+++NV   + + E+   + S  ++            +F+ V +DP RAG +
Sbjct: 243 AAQYNLEANRVDNVKVVRISAEEFSEAYSGTKEFTRLAGIDLKGYRFSTVFVDPPRAGLD 302

Query: 378 GIVDQLSAL--GAKRVVYVSCNPATLARDSQSLLSQGFRLEKLGMLDMFPHTSHLESMAL 435
              D   AL  G   ++Y+SCNP TL + + + L    R+      D FP+T HLE   L
Sbjct: 303 ---DGTLALVRGFDHILYISCNPETL-KANVAALHDTHRIAAAAAFDQFPYTDHLECGLL 358

Query: 436 FVKK 439
             ++
Sbjct: 359 LSRR 362