Pairwise Alignments

Query, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

Subject, 747 a.a., (p)ppGpp synthetase, RelA/SpoT family from Pseudomonas stutzeri RCH2

 Score =  662 bits (1707), Expect = 0.0
 Identities = 346/753 (45%), Positives = 490/753 (65%), Gaps = 27/753 (3%)

Query: 1   MVAVRSAH-LNPDQQFELETWIASLTQEGKTAAKLTAVYRDCEQLLAGNPQGPLL--LWR 57
           MV VR+   +N D    L+ W+  +      A    A+   CE       Q      LW 
Sbjct: 1   MVQVRALQPINTDGSINLDGWLDHVLGMDP-ALDRAALKEACEFAREAEQQANAAQNLWS 59

Query: 58  --------GREMIEILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGV 109
                   G E+ EIL  L +D+ +LVAA+++     G +    + + +G  V KLI GV
Sbjct: 60  EGTSSYQIGLEIAEILADLKLDQDSLVAAVIYRGVREGKIQLADVNQRFGSVVAKLIEGV 119

Query: 110 EEMAAIG-QLNVT---MHGSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNE 165
             MAAI   LN     + GS+A  QV+N+R+ML+AMVDD R  +IKLAER C +R VK  
Sbjct: 120 LRMAAISASLNPRESLVLGSQA--QVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKLA 177

Query: 166 PDEVRRVAAKECANIYAPLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVRE 225
            DE R+  A+E  +IYAPLA+RLGIG +KWE+ED +FRY +P+ YKQIA+ L ERR+ RE
Sbjct: 178 DDEKRQRVAREVFDIYAPLAHRLGIGHIKWELEDLSFRYLEPEQYKQIAQLLHERRLDRE 237

Query: 226 QYIRDFVSDLRAEMKQSGINAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKL 285
           QYI++ V  L+ E+  +GI  ++ GR KHIYSIWRKMQKK L F +++DVRAVR++  ++
Sbjct: 238 QYIQNVVQQLKDELTATGIQPDIDGRAKHIYSIWRKMQKKGLQFSQIYDVRAVRVLVPEV 297

Query: 286 QDCYAALGIVHTKYKHLPNEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEE 345
           +DCY ALGIVHT ++H+P EFDDY+ANPK NGY+S+HT ++GPEGK +E+QIRT  MHEE
Sbjct: 298 RDCYTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEE 357

Query: 346 SELGVAAHWKYK-EGSSAARSGYDEKITWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVY 404
           +ELGV AHW+YK    ++    Y+EKI WLR++L+W EE+ D G + D+LR  +  DRVY
Sbjct: 358 AELGVCAHWRYKGTDVNSGSDHYEEKIAWLRQVLEWHEELGDIGGLADQLRVDIEPDRVY 417

Query: 405 AFTPKGDVVDLPMGATPLDFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAK 464
            FTP G  +DLP GATPLDFAY +H+E+GH C GAKV GRIVP  + LQ G+QVEIIT+K
Sbjct: 418 VFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCRGAKVNGRIVPLNYSLQTGEQVEIITSK 477

Query: 465 EPNPSRDWLNPSLGFVHSGRARAKINAWFRKQSREKNLEAGREILEIELAKIGANLKHAE 524
             +PSRDWLNP+LG++ + R+RAKI  WF+ Q+R++N+ AG+ +LE EL ++       +
Sbjct: 478 HGSPSRDWLNPNLGYITTSRSRAKIVHWFKLQARDQNVAAGKALLERELGRLDLPPVDFD 537

Query: 525 AYALKRFNVNSVDEMYVGIGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLT 584
             A ++ N+ + ++M+  +G+GDLR+  +VN    LV      ++ +L        +   
Sbjct: 538 KLA-EKANLKNAEDMFAALGAGDLRLAHLVNMAQQLVEPERGYDQLELI------PRRSA 590

Query: 585 PNRPHKDA-VVVEGVDNLMTHLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLH 643
           P +P K   V ++GV NL+T +A CCQP+PGD I GYITQGRG+S+HR DC  + +L+  
Sbjct: 591 PYKPGKRGDVQIQGVGNLLTQMAGCCQPLPGDPIVGYITQGRGVSIHRQDCPSVLQLAGR 650

Query: 644 APERIIDTVWGSGFVGSYLLTVRVEAMERSGLLKDITTLLANEKVKVASMKSRSDYKRQI 703
            PERII   WG     +Y + + + A +R+GLL+DI+ +L NE++ V SM +RS+ +   
Sbjct: 651 EPERIIQVSWGPVPEKTYPVEIMIRAYDRAGLLRDISQMLLNERINVLSMNTRSNKEDST 710

Query: 704 IIMDFDLEVNNVEALARVSKRIEQIKDVMLVKR 736
             M   +E+  + AL R+  RI Q+ +++  KR
Sbjct: 711 AQMTLTIEIPGLNALGRLLSRISQLPNIIEAKR 743