Pairwise Alignments

Query, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

Subject, 699 a.a., bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) from Shewanella amazonensis SB2B

 Score =  389 bits (999), Expect = e-112
 Identities = 226/680 (33%), Positives = 369/680 (54%), Gaps = 42/680 (6%)

Query: 63  EILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLNVTM 122
           +IL  + +D  TL+AALL        +  E L E +G  V  L+ GV +      L+   
Sbjct: 54  KILSDMRLDHETLMAALLHDTIEDTHVTKEDLAELFGDAVADLVEGVSK------LDKLK 107

Query: 123 HGSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECANIYA 182
              +  AQ +N R+M++AM  D R ++IKLA+R  N+R +     + RR  A+E   IYA
Sbjct: 108 FRDKKEAQAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYA 167

Query: 183 PLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEMKQS 242
           P+ANRLGI  +K E+ED  F+   P  Y+ + + +   R  R++ I++  + ++A ++ +
Sbjct: 168 PIANRLGIHNIKTELEDLGFQAYYPMRYRVLKEVVKAARGNRKELIQNIKTGIQARLEDA 227

Query: 243 GINAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTKYKHL 302
           GI+A+V GR K++YSI+ KM+ K L F E+ D+ A R+I D +  CY  LG +H  YK  
Sbjct: 228 GIHAKVKGREKNLYSIYNKMRGKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPR 287

Query: 303 PNEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGSSA 362
           P  F DY+A PK NGYQS+HT + GP G  +EIQIRT  M + ++ GVAAHW YK G+  
Sbjct: 288 PGRFKDYIAIPKANGYQSLHTSLFGPHGVPVEIQIRTDDMDQMADKGVAAHWVYKNGNEN 347

Query: 363 ARSGYDEKI-TWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVYAFTPKGDVVDLPMGATP 421
             +    +   W++ LL+ Q+  S S E ++ +++++F D +Y FTP+G +++LP+GAT 
Sbjct: 348 GSTTTQVRARKWMQSLLELQQSASSSFEFVENVKTELFPDEIYVFTPEGRILELPVGATA 407

Query: 422 LDFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAKEPNPSRDWLNPSLGFVH 481
           +DFAY +H++VG+ C+GA+V  +  P +  L  G  VEIITAK   P+  WLN    FV 
Sbjct: 408 VDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVEIITAKGAKPNAAWLN----FVV 463

Query: 482 SGRARAKINAWFRKQSREKNLEAGREIL-----EIELAKIGANLKHAEAYALKRFNVNSV 536
           +G+ARAKI    +   +++ +  GR +L     E +L  +   L        K  ++NS 
Sbjct: 464 TGKARAKIRQVLKNLKQDEAIALGRRLLNHALGENKLDSVAPELLDKVIQETKHKDLNS- 522

Query: 537 DEMYVGIGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLTPNRPHKDAVVVE 596
             +   IG G        N ++ ++    A+     A+ + Q    L P         + 
Sbjct: 523 --LLADIGLG--------NAMSIVI----AQRLTGGAVPEKQSETHLMP---------IR 559

Query: 597 GVDNLMTHLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLHAPERIIDTVWGSG 656
           G + ++   A+CC PIPGD +  +++ G+G+ VH  +C  +       P++ I   W   
Sbjct: 560 GAEGMLVSFAKCCHPIPGDAVIAHVSPGKGLVVHMENCANIRGYQ-GEPDKYIPVHWDKV 618

Query: 657 FVGSYLLTVRVEAMERSGLLKDITTLLANEKVKVASMKSRSDYKRQIIIMDFDLEVNNVE 716
               Y   +RVE +   G L  IT+++A+E   + ++ S  +   ++ +++  + V +  
Sbjct: 619 DGVEYQANLRVEIVNHQGALAKITSIIASEGSNIHNL-STEERDGRVYLINLRISVRDRI 677

Query: 717 ALARVSKRIEQIKDVMLVKR 736
            LA V +RI  + +V+   R
Sbjct: 678 HLANVMRRIRVLPEVLRTSR 697