Pairwise Alignments

Query, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA (NCBI) from Rhodospirillum rubrum S1H

 Score =  433 bits (1114), Expect = e-125
 Identities = 248/680 (36%), Positives = 388/680 (57%), Gaps = 31/680 (4%)

Query: 64  ILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLNVTMH 123
           IL    +D  +++ ALL           E + + +G +V +L+ GV ++  I        
Sbjct: 57  ILTRYKLDCASIITALLHDTIEDTEATLEDVRQLFGNDVARLVDGVTKLTRI------QI 110

Query: 124 GSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVK--NEPDEVRRVAAKECANIY 181
            S+ + Q +N R++LLAM +D R +++KLA+R+ N+R +    +P++  R+A  E   IY
Sbjct: 111 SSDHAKQAENFRKLLLAMSEDIRVLMVKLADRLHNMRTLHFIRKPEKRARIAL-ETMEIY 169

Query: 182 APLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEMKQ 241
           APLA R+G+ ++K E+ED AFR   PD  + I  +L+  R      +   +  L+A + +
Sbjct: 170 APLAERIGMAEIKEELEDLAFRELYPDAKEGIEARLTFLREQGGTLVPKVIDQLKAALAE 229

Query: 242 SGINAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTKYKH 301
            G+ AE++GR K  YSIW+KM++K+++F++L D+ A RI  + L+ CY ALGI+H  Y  
Sbjct: 230 HGLTAEITGREKTPYSIWQKMKRKNISFEQLSDIMAFRITVENLEQCYQALGIIHASYPM 289

Query: 302 LPNEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGSS 361
           +P+ F DY++ PK NGYQSIHT ++GPE   IEIQIRT +MH  +ELGVAAHW YK+GS 
Sbjct: 290 IPDRFKDYISTPKRNGYQSIHTAVIGPERLRIEIQIRTAEMHSVAELGVAAHWSYKQGSP 349

Query: 362 AARSGYDEKITWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVYAFTPKGDVVDLPMGATP 421
                   +  W+R+LL+  E  S   E L+  + ++F D+V+ FTPKGD++ LP GATP
Sbjct: 350 VMDG---RQYRWIRELLEILEHTSSPEEFLEHTKLEMFSDQVFCFTPKGDLIGLPSGATP 406

Query: 422 LDFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAKEPNPSRDWLNPSLGFVH 481
           +DFAY +H++VG RC+ AKV GR+VP    L  GDQVEI T+K   PS +W      FV 
Sbjct: 407 VDFAYAVHTQVGDRCVSAKVNGRLVPLRTPLHNGDQVEIATSKAQTPSPEWER----FVV 462

Query: 482 SGRARAKINAWFRKQSREKNLEAGREILEIELAKIGANLKHAEA---YALKRFNVNSVDE 538
           +G+ARA+I  + R Q R++ L  GR++L  E A    N +  E      LK+F  +SV++
Sbjct: 463 TGKARAQIRKFVRSQRRDQYLILGRQLL--ERAFKAENYEMTEKGLDGVLKKFRADSVED 520

Query: 539 MYVGIGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLTPNRPHKDAVVVEG- 597
           + V +G G L   ++V  +      P  +   KLA   +   +T  P      +  ++G 
Sbjct: 521 LIVDVGEGQLPAREVVQAV-----YPGLKMVPKLA-AVVTLGRTKKPRASDDHSFKIKGM 574

Query: 598 VDNLMTHLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLHAPERIIDTVWGSGF 657
           +  +  H A+CC  +PGD I G +T G+GI++H  DC+QLE+ S   PER +D  W +  
Sbjct: 575 IPGMALHFAKCCHSLPGDRIVGIVTTGKGITIHTIDCDQLEQFS-DEPERWLDLAWDAEA 633

Query: 658 VGS-YLLTVRVEAMERSGLLKDITTLLANEKVKVASMKSRSDYKRQIIIMDFDLEVNNVE 716
               ++  V V      G L  +TT++A     + ++K  ++ ++    M  D+EV +V 
Sbjct: 634 DSQVHVGRVNVVVANEPGSLGALTTVIAKNLGNITNLKI-TNRQQDFFDMIVDVEVKDVR 692

Query: 717 ALARVSKRIEQIKDVMLVKR 736
            L  +   +     +  V+R
Sbjct: 693 HLTNIIAALRATSAINYVER 712