Pairwise Alignments

Query, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) from Shewanella loihica PV-4

 Score =  380 bits (975), Expect = e-109
 Identities = 215/689 (31%), Positives = 365/689 (52%), Gaps = 60/689 (8%)

Query: 64  ILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLNVTMH 123
           IL  + +D  TL+AALL        +  E L E +G  V +L+ GV +      L+    
Sbjct: 55  ILADMRLDHETLMAALLHDTIEDTPVTKEELSELFGESVGELVEGVSK------LDKLKF 108

Query: 124 GSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECANIYAP 183
             +  AQ +N R+M++AM  D R ++IKLA+R  N+R +     + RR  A+E   IYAP
Sbjct: 109 RDKKEAQAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAP 168

Query: 184 LANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEMKQSG 243
           +ANRLGI  +K E+ED  F+   P  Y+ + + +   R  R++ I++    ++  ++ +G
Sbjct: 169 IANRLGIHNIKTELEDLGFQAYYPMRYRVLKEVVKSARGNRKELIQNIEGAIKTRLEDTG 228

Query: 244 INAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTKYKHLP 303
           +   V GR K++YSI+ KM  K L F E+ D+ A R+I D +  CY  +G +H  YK  P
Sbjct: 229 LKGTVKGREKNLYSIYNKMCNKELQFQEVMDIYAFRVIVDSIDTCYRVMGAMHGLYKPRP 288

Query: 304 NEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGSSAA 363
             F DY+A PK NGYQS+HT + GP G  +EIQIRT+ M + ++ GVAAHW YK G+ +A
Sbjct: 289 GRFKDYIAIPKANGYQSLHTSLFGPHGVPVEIQIRTEDMDQMADKGVAAHWLYK-GAGSA 347

Query: 364 RSGYDEKI---TWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVYAFTPKGDVVDLPMGAT 420
           + G   ++    W++ LL+ Q+  S S E ++  ++++F + +Y FTP+G +++LP+GAT
Sbjct: 348 QQGTTTQVRARKWMQSLLELQQSASTSFEFVENFKTELFPEEIYVFTPEGRILELPVGAT 407

Query: 421 PLDFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAKEPNPSRDWLNPSLGFV 480
            +DFAY +H++VG+ C+GA+V  +  P +  L  G  +EIITAK   P+  WLN    FV
Sbjct: 408 AVDFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTIEIITAKGARPNAAWLN----FV 463

Query: 481 HSGRARAKINAWFRKQSREKNLEAGREIL-------------EIELAKIGANLKHAEAYA 527
            +G+ARAKI    +    +  +  G+ +L             + ++ K+ +  KHA    
Sbjct: 464 VTGKARAKIRQLLKSLKEDDAVLLGKRLLNHALGDIKLKDIPQEQIDKVVSETKHA---- 519

Query: 528 LKRFNVNSVDEMYVGIGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLTPNR 587
                  ++D +   IG G           NA+           +  ++L+ ++      
Sbjct: 520 -------TLDSLLADIGLG-----------NAM---------SIVIAQRLKGDRVEQHEH 552

Query: 588 PHKDAVVVEGVDNLMTHLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLHAPER 647
              + + + G + ++   A CC+PIPGD +  +++ G+G+ VH   C  +       P++
Sbjct: 553 KESNMMPIRGAEGMLVSFANCCRPIPGDAVIAHVSPGKGLVVHMESCANIRGYQ-GEPDK 611

Query: 648 IIDTVWGSGFVGSYLLTVRVEAMERSGLLKDITTLLANEKVKVASMKSRSDYKRQIIIMD 707
            I   W +     +   +R+E +   G L  IT+++A E   + ++ S  +   ++ +++
Sbjct: 612 YIPVHWDNAEGVEFQANLRIEIVNHQGALAKITSIVAAEGSNIHNL-STEERDGRVFLIN 670

Query: 708 FDLEVNNVEALARVSKRIEQIKDVMLVKR 736
             + V +   LA V +RI  + +V+   R
Sbjct: 671 LRISVTDRVHLANVMRRIRVLPEVLRTSR 699