Pairwise Alignments

Query, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., (p)ppGpp synthetase I, SpoT/RelA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  391 bits (1004), Expect = e-113
 Identities = 229/675 (33%), Positives = 356/675 (52%), Gaps = 33/675 (4%)

Query: 64  ILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLNVTMH 123
           IL    +D  T++ ALL             LE  +GRE+ +L++GV  +  + QL+    
Sbjct: 63  ILAEQRLDDSTIITALLHDTVEDTRSTFAELESQFGREIAELVNGVTNLTNL-QLS---- 117

Query: 124 GSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECANIYAP 183
            S  + Q +N R++ +AM  D R +++KLA+R+ N+R +K+ P E +   A+E  +IYAP
Sbjct: 118 -SRETKQAENFRKLFMAMSKDLRVILVKLADRLHNMRTIKHMPVEKQVKKARETMDIYAP 176

Query: 184 LANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEMKQSG 243
           LA R+G+  ++ E+ED +FR   PD  + I ++  + +      ++   SD+R E+   G
Sbjct: 177 LAGRMGMQWMRDELEDLSFRVLNPDGRQSIMRRFIKLQNETGDVVQKITSDIRKELDAHG 236

Query: 244 INAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTKYKHLP 303
           I A+V GR K  YSIWRKM+ K L F  L D+   R+I     DCY  LG +H +++ +P
Sbjct: 237 IEADVYGRAKKPYSIWRKMEAKQLGFSRLSDIYGFRVITHSEDDCYGVLGAIHQRWRAVP 296

Query: 304 NEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGSSAA 363
             F DY++ PK NGY+SIHT + G +GK +E+QIRT+QMHE +E GVAAHW Y++G    
Sbjct: 297 GRFKDYISQPKSNGYRSIHTTVSGRDGKRVEVQIRTRQMHEVAEAGVAAHWSYRDGVQVE 356

Query: 364 RSGYDEKITWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVYAFTPKGDVVDLPMGATPLD 423
                +   W+  L +  E   D GE L+ ++ +++ D+V+ FTPKG+VV LP GATPLD
Sbjct: 357 NPFAVDPAEWIASLSERFESSEDHGEFLEHVKLEMYSDQVFCFTPKGEVVKLPKGATPLD 416

Query: 424 FAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAKEPNPSRDWLNPSLGFVHSG 483
           +AY IH+ +G  C+GAKV G  VP   +L+ G  VEIITA    P   W++     V +G
Sbjct: 417 YAYGIHTRIGDSCVGAKVDGIRVPLWTRLKNGQSVEIITADGQRPQATWID----IVVTG 472

Query: 484 RARAKINAWFRKQSREKNLEAGREILEIELAKIGANL-KHAEAYALKRFNVNSVDEMYVG 542
           RA+  I    R++ R + ++ G+E+  +    +G  +   A   A  +       E+   
Sbjct: 473 RAKQAIRRSLREEDRARFVKLGQELARVAFDHVGKRVTDKALKTAAHQLGYGGRLELLSA 532

Query: 543 IGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLTPNRPHKDAVVVEGVDNLM 602
           +GS D+    +V     L  +   +  D++A                 D  VV    +  
Sbjct: 533 LGSADISARDVV---EVLYPELQGQGGDEVA----------------ADRAVVGLHSDQS 573

Query: 603 THLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLHAPERIIDTVWGSG-FVGSY 661
              ARCCQP+PG+ I G   +G G+ VH  DC  LEE       R ID  W SG     +
Sbjct: 574 FERARCCQPVPGERIVGIAYRGHGVRVHAIDCPALEEFE-DEMRRWIDLQWHSGRHAAVH 632

Query: 662 LLTVRVEAMERSGLLKDITTLLANEKVKVASMKSRSDYKRQIIIMDFDLEVNNVEALARV 721
            + + V      G+L  I TL+  ++  ++ +    D K     +  ++EV ++E L RV
Sbjct: 633 AVRLDVTIGNDQGVLGRICTLIGEQRANISDLHF-VDRKPDFYRLLLEVEVRDLEHLHRV 691

Query: 722 SKRIEQIKDVMLVKR 736
              ++   DV  ++R
Sbjct: 692 MTAVQADTDVAGLER 706