Pairwise Alignments

Query, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) from Shewanella sp. ANA-3

 Score =  383 bits (984), Expect = e-110
 Identities = 223/679 (32%), Positives = 360/679 (53%), Gaps = 41/679 (6%)

Query: 64  ILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLNVTMH 123
           IL  + +D  TL+AALL        +  E L E +G  V +L+ GV +      L+    
Sbjct: 55  ILAEMRLDHETLMAALLHDTIEDTHVTKEDLAEQFGEAVAELVEGVSK------LDKLKF 108

Query: 124 GSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECANIYAP 183
             +  AQ +N R+M++AM  D R ++IKLA+R  N+R +     + RR  A+E   IYAP
Sbjct: 109 RDKKEAQAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAP 168

Query: 184 LANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEMKQSG 243
           +ANRLGI  +K E+ED  F+   P  Y+ + + +   R  R++ I+   + +   +  +G
Sbjct: 169 IANRLGIHNIKTELEDLGFQAYYPMRYRVLKEVVKAARGNRKELIQGIEAAVLTRLNDAG 228

Query: 244 INAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTKYKHLP 303
           I  +V GR K++YSI+ KMQ K L F E+ D+ A R+I D +  CY  LG +H  YK  P
Sbjct: 229 IKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRP 288

Query: 304 NEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGSSAA 363
             F DY+A PK NGYQS+HT + GP G  +EIQIRT+ M + ++ GVAAHW YK G+   
Sbjct: 289 GRFKDYIAIPKANGYQSLHTSLFGPHGVPVEIQIRTEDMDQMADKGVAAHWAYKGGADGQ 348

Query: 364 RSGYDEKI-TWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVYAFTPKGDVVDLPMGATPL 422
            +    +   W++ LL+ Q+  S S E ++ +++++F + +Y FTP+G +++LP+ AT +
Sbjct: 349 GTTTQVRARKWMQSLLELQQSASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAV 408

Query: 423 DFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAKEPNPSRDWLNPSLGFVHS 482
           DFAY +H++VG+ C+GA+V  +  P +  L  G  VEIITAK   P+  WLN    FV +
Sbjct: 409 DFAYEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVEIITAKGARPNAAWLN----FVVT 464

Query: 483 GRARAKINAWFRKQSREKNLEAGREILEIELAKIGANLKHAE-----AYALKRFNVNSVD 537
           G+ARAKI    +    +  +  GR +L   L K   +   AE         K  N+NS  
Sbjct: 465 GKARAKIRQVLKSLKADDAIALGRRLLNHALGKTKLDSIPAEQIDKVVRDTKHANLNS-- 522

Query: 538 EMYVGIGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLTPNRPHKDAVVVEG 597
            +   IG G+     I   +            D L  ++ +++  +           + G
Sbjct: 523 -LLADIGLGNAMSIVIAQRLIG----------DNLENQESRDSHLMP----------IRG 561

Query: 598 VDNLMTHLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLHAPERIIDTVWGSGF 657
            + ++   A CC+PIPGD +  +++QG+G+ VH  +C  +       P++ I   W +  
Sbjct: 562 AEGMLVTFANCCRPIPGDAVIAHVSQGKGLVVHMENCANIRGYQ-GEPDKYIPVQWDNVE 620

Query: 658 VGSYLLTVRVEAMERSGLLKDITTLLANEKVKVASMKSRSDYKRQIIIMDFDLEVNNVEA 717
              Y   +RVE +   G L  IT+++A E   + ++ S  +   ++ +++  + V +   
Sbjct: 621 GVEYQANLRVEIVNHQGALAKITSIIAAEGSNIHNL-STEERDGRVYLINLRISVKDRIH 679

Query: 718 LARVSKRIEQIKDVMLVKR 736
           LA V +RI  + +V+   R
Sbjct: 680 LANVMRRIRVLPEVLRTSR 698