Pairwise Alignments

Query, 403 a.a., multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., poly(A) polymerase (RefSeq) from Shewanella loihica PV-4

 Score = 78.2 bits (191), Expect = 5e-19
 Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 20/224 (8%)

Query: 4   YLVGGAVRDQLLQLPVYDRDWVVVGSSPQAM--LAAGFQAVGKDFPV--------FLHPN 53
           YLVGG VRD LL L   D D VV  ++P+ +  L    + VG+ F +         +   
Sbjct: 83  YLVGGGVRDILLGLEPKDFD-VVTNATPEEIKKLFRNCRLVGRRFRLAHIVFGRDVIEVA 141

Query: 54  SKEEHALARTERKTSVGYTGFACHYAPDVTLEEDLLRRDLTINAMAQDNSGQLIDPY-GG 112
           +   H +   E+ + V   G         T++ED  RRD T+NA+  D S   I  Y GG
Sbjct: 142 TLRGHHVDSGEKISKVNAEGRLLRDNVYGTIDEDAERRDFTVNALYYDISDFSIHSYGGG 201

Query: 113 QRDLAAKVLRHV---SPAFVEDPLRVLRVARFAAKLHHLGFTVAEETMQLMAKIAQSGEL 169
            +DL ++ LR +      + EDP+R+LR  RFA K   LG ++ +   Q ++++A    L
Sbjct: 202 LQDLESRTLRLIGDPQKRYREDPVRMLRAVRFATK---LGMSIDKAAAQPISELAPL--L 256

Query: 170 QHLTAERVWQEWHKSLSAHHPEMFLQVLRDCGALAVVLPEIDRL 213
           + + A R+++E  K   A   +    ++RD G  A + P +D L
Sbjct: 257 KDIPAARMYEEVLKLFFAGQAQNNYVMMRDFGLFAPLFPLVDNL 300