Pairwise Alignments

Query, 403 a.a., multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., polyA polymerase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 7e-17
 Identities = 68/226 (30%), Positives = 104/226 (46%), Gaps = 20/226 (8%)

Query: 2   QIYLVGGAVRDQLLQLPVYDRDWVVVGSSPQAM--LAAGFQAVGKDFPV--------FLH 51
           Q YLVGG VRD LL L   D D VV  ++P+ +  L    + VG+ F +         + 
Sbjct: 33  QAYLVGGGVRDLLLGLEPKDFD-VVTNATPEEIKKLFRNCRVVGRRFRLAHIVFGRDVIE 91

Query: 52  PNSKEEHALARTERKTSVGYTGFACHYAPDVTLEEDLLRRDLTINAMAQDNSGQLIDPY- 110
             +   H     E+ +     G          ++ED  RRD T+NA+  D S   I  Y 
Sbjct: 92  VATFRGHHGESNEKISKANAEGRLLRDNVYGEIDEDAERRDFTVNALYYDISDYSIRSYG 151

Query: 111 GGQRDLAAKVLRHV---SPAFVEDPLRVLRVARFAAKLHHLGFTVAEETMQLMAKIAQSG 167
           GG  DL A  LR +      + EDP+R+LR  RFA K   L  T+ E T + + ++A   
Sbjct: 152 GGMEDLKAGTLRLIGDPETRYREDPVRMLRAVRFATK---LSMTIDEVTAKPIKQLAPL- 207

Query: 168 ELQHLTAERVWQEWHKSLSAHHPEMFLQVLRDCGALAVVLPEIDRL 213
            L+ + A R+++E  K   A        ++++    A + P++D L
Sbjct: 208 -LKDIPAARMYEEVLKLFFAGKAVANFDMMQEYKLFAPLFPQVDAL 252