Pairwise Alignments

Query, 403 a.a., multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., tRNA nucleotidyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  121 bits (303), Expect = 5e-32
 Identities = 111/391 (28%), Positives = 189/391 (48%), Gaps = 45/391 (11%)

Query: 1   MQIYLVGGAVRDQLLQLPVYDRDWVVVGSSPQAMLAAGFQAVGKDFPVFLHPNSKEEHAL 60
           ++ Y+VGG VRD  LQ P  D D VVVGS       A  +A+GK      + +  +    
Sbjct: 55  LECYVVGGYVRDIFLQRPSKDIDVVVVGSG-----IAMAEALGKRLGRGAYVSVFKNFGT 109

Query: 61  ARTERK-TSVGYTGFACH---------YAPDVTLEEDLLRRDLTINAMA----QDNSGQL 106
           A+ + K T V + G                D TLE+D  RRD TINAMA    +   G+L
Sbjct: 110 AQVKYKGTEVEFVGARKESYQRDSRKPIVEDGTLEDDQNRRDFTINAMAVCLNKARFGEL 169

Query: 107 IDPYGGQRDLAAKVLR-HVSP--AFVEDPLRVLRVARFAAKLHHLGFTVAEETMQLMAKI 163
           +DP+GG  D+  K +R  + P   F +DPLR++R  RFA +L+   F + ++T + + + 
Sbjct: 170 VDPFGGMADMKEKTIRTPLDPDITFSDDPLRMMRCIRFATQLN---FYIDDDTFESLCR- 225

Query: 164 AQSGELQHLTAERVWQEWHKSLSAHHPEMFLQVLRDCGALAVVLPEIDRLFGVPQPEKWH 223
                ++ ++ ER+  E +K + +  P      L   G L ++ PE+  L GV +     
Sbjct: 226 -NKDRIEIISRERIADELNKIILSPIPSKGFVELERSGLLPLIFPELAALQGV-ETRNGR 283

Query: 224 PEIDTGIHTLMVAKQAAQLSDSLLVRFAAQVHDLGKGVT----PPSEWPRHKLHCHTGLN 279
              D   HTL V    ++ +D+L +R+AA +HD+ K  T    P + W  H  H   G  
Sbjct: 284 SHKDNFYHTLEVLDNISKKTDNLWLRWAALLHDIAKPATKRWEPKAGWTFHN-HNFIGEK 342

Query: 280 IIESLCERIRVP-NEFRDLALAVCAQHSN-IHRADELKPTTKLKVLGLLDVWRKPERLEQ 337
           +I ++  ++++P NE       + + H   I  AD++   + ++ L    ++   + ++ 
Sbjct: 343 MIPNIFRKMKLPMNEKMKYVQKMVSLHMRPIVIADDVVTDSAVRRL----LFEAGDDIDD 398

Query: 338 VLLCCEADHRGRLGLESEPYPQREIFLRAYQ 368
           ++  CEAD      + S+   +++ FL  +Q
Sbjct: 399 LMTLCEAD------ITSKNMERKQRFLNNFQ 423