Pairwise Alignments

Query, 403 a.a., multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., multifunctional CCA protein from Burkholderia phytofirmans PsJN

 Score =  414 bits (1065), Expect = e-120
 Identities = 222/410 (54%), Positives = 278/410 (67%), Gaps = 13/410 (3%)

Query: 1   MQIYLVGGAVRDQLLQLPVYDRDWVVVGSSPQAMLAAGFQAVGKDFPVFLHPNSKEEHAL 60
           M IY VGGA+RD+LL +PV DRD+VVVG++P+ M+A G++ VGKDFPVFLHP + EE+AL
Sbjct: 1   MNIYAVGGAIRDELLGVPVQDRDYVVVGATPEQMVAQGYRPVGKDFPVFLHPQTHEEYAL 60

Query: 61  ARTERKTSVGYTGFACHYAPDVTLEEDLLRRDLTINAMAQDN------SGQLIDPYGGQR 114
           ARTERKT+ GY GF   YAPDVTLEEDL RRDLTINAMA++       +G +IDP+ GQ 
Sbjct: 61  ARTERKTAAGYHGFQFFYAPDVTLEEDLARRDLTINAMAREVRPDGELTGPVIDPFNGQG 120

Query: 115 DLAAKVLRHVSPAFVEDPLRVLRVARFAAKLHHLGFTVAEETMQLMAKIAQSGELQHLTA 174
           D+ A+V RHVS AF+EDP+R+LR+ARFAA+   + FTVA ET+ LM K+   GE+  L A
Sbjct: 121 DVQARVFRHVSDAFLEDPVRILRIARFAARF--VDFTVAPETLALMRKMVADGEVDALVA 178

Query: 175 ERVWQEWHKSLSAHHPEMFLQVLRDCGALAVVLPEIDRLFGVPQPEKWHPEIDTGIHTLM 234
           ERVWQE  + L    P    +VLR+CGALA +LPEID LFGV Q   +HPE+DTG+H +M
Sbjct: 179 ERVWQEVSRGLMEKKPSRMFEVLRECGALARILPEIDALFGVLQRADYHPEVDTGVHVMM 238

Query: 235 VAKQAAQLSDSLLVRFAAQVHDLGKGVTPPSEWPRHKLHCHTGLNIIESLCERIRVPNEF 294
           V   AAQ   +L VRFAA  HDLGK  TP    PRH  H    +++++ LCER+RVPN+ 
Sbjct: 239 VVDHAAQQGYALQVRFAALAHDLGKATTPEDMLPRHIGHEGRSVDLLKPLCERLRVPNDC 298

Query: 295 RDLALAVCAQHSNIHRADELKPTTKLKVLGLLDVWRKPERLEQVLLCCEADHRGRLGLES 354
           RDLA+ V  +H NIHR  E+     +++L   D  RKP R  + L  CEAD RGRLG E 
Sbjct: 299 RDLAVLVAREHGNIHRVMEMGAAALVRLLERSDAIRKPARFAEALQACEADARGRLGFER 358

Query: 355 EPYPQREIFLRAYQAALGVAVQAV---IADGFQGKHIKEELDKRRVSAIE 401
             YPQ E    A  AA GV   AV   +AD   G  IK+ L + RV A+E
Sbjct: 359 REYPQAERLRVALVAARGVDAGAVAKRLADAPAG--IKDALHQERVRAVE 406