Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., Type II secretory pathway, component ExeA (predicted ATPase) from Pseudomonas stutzeri RCH2

 Score = 63.5 bits (153), Expect = 2e-14
 Identities = 68/253 (26%), Positives = 110/253 (43%), Gaps = 23/253 (9%)

Query: 2   YLNFFGFDELPFSI-VPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60
           +LN +GF   PF+  VP  ++    ++     +H  A         ++TG  G+GKT + 
Sbjct: 10  FLNHYGFSHDPFAARVPGFKFFPAQRKPVLGQLHHLARYSQL--LLLVTGPEGSGKTLLR 67

Query: 61  RAILASLPGKTRAGMILNP--TFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAE 118
           +A++AS   ++   +++ P  T     LL  I     +S P       +TQV    L   
Sbjct: 68  QALVASSNKQSVQSVVITPQGTMDASALLSQIAQA--LSSPAADFDGIMTQVTQLALT-- 123

Query: 119 HAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQ 178
              G +V L++D+A+ L    +E L  L     E+     V L G+P L  +L      +
Sbjct: 124 ---GQEVYLLVDDAECLTGAAVETLLRLAAGSPEARP--HVFLFGEPALAGRL------E 172

Query: 179 LAQRITGRYH---LLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLIN 235
                  RYH   L P  E++T +Y+  R+E A    E  N +    + EQ+ G P  IN
Sbjct: 173 ALSEGEERYHAIALQPYEEDETREYLALRLEGAGSGIECLNEEQIVRVHEQSGGWPGAIN 232

Query: 236 LVCDAALKQAYQA 248
            +    L  A Q+
Sbjct: 233 QMARDELLAAMQS 245