Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

 Score = 58.5 bits (140), Expect = 6e-13
 Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 26/248 (10%)

Query: 48  LTGEVGTGKTTVARAILASLPGKTRAGMILNPTFSD--LELLEAICDEFEVSYPKKATLK 105
           +TG  G+GKT + +A++AS   ++   ++++   +     +L+ +     V+  +  ++ 
Sbjct: 55  VTGPQGSGKTLLRQALVASTNKQSVQSVVISARGAGDAAGVLQQVAQALSVAQAEMQSI- 113

Query: 106 KLTQVLHEFLLAEHAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQP 165
            L+QV+   L      G +V L++D+A+ L    LE L  L     E      V L G+P
Sbjct: 114 -LSQVVQLGLT-----GQEVYLLVDDAEQLGDSALEALLGLAAGTPEGRP--HVFLFGEP 165

Query: 166 ELQEKLRLPQLRQLAQRITG-----RYHLL---PLNEEQTADYIRFRIEQASGNPELFNR 217
            L     L +L Q+   + G     R+H++   P  EE+T +Y+  R+E A     LF  
Sbjct: 166 SL-----LDRLDQMCADLQGDVEGERFHVIELQPYTEEETREYLAQRLEGAGQGIALFTA 220

Query: 218 KACQWIAEQTHGIPRLINLVCDAALKQAYQAGEPTLSLARI--KLACQEVMSFQSSVYQV 275
                I EQ+ G P  IN V   ++ +A  A    +    +  K+  + V++  + V   
Sbjct: 221 DQITDIHEQSDGWPGAINQVARDSMIEAMIASRSAVKRPSVGFKMPKKHVLALGAVVIVA 280

Query: 276 ASAKPPVP 283
            +A   +P
Sbjct: 281 VAAAVLIP 288