Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., type II secretory pathway, component ExeA (predicted ATPase) from Dechlorosoma suillum PS

 Score =  167 bits (422), Expect = 1e-45
 Identities = 92/265 (34%), Positives = 147/265 (55%), Gaps = 2/265 (0%)

Query: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60
           MYL  +G  E PF I P+  + +        +  L   + +  G   +TGEVG+GKT + 
Sbjct: 1   MYLEHYGLREAPFRITPHTDFFFAGGNRGATLEALIYAISNDEGIVKVTGEVGSGKTMLC 60

Query: 61  RAILASLPGKTRAGMILNPTFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAEHA 120
           R +L  LP       + NP++S  E+L A+  E ++  P+      L + L E LL  +A
Sbjct: 61  RMLLEKLPATVETVYLANPSYSRDEILHALAAELQLELPEGRP-SLLLKALQERLLQSYA 119

Query: 121 QGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQLA 180
            G +V+++IDEA  +  + LE++RLL+NLE+  HKLL+++L GQPEL E+L  P LRQL 
Sbjct: 120 AGRRVVVLIDEAHAMPGETLEEIRLLSNLESSRHKLLQIVLFGQPELDERLAQPDLRQLK 179

Query: 181 QRITGRYHLLPLNEEQTADYIRFRIEQAS-GNPELFNRKACQWIAEQTHGIPRLINLVCD 239
           +RIT  + L PL       Y+ FR+  A    P++F+ +A Q I   + G+ R IN++ D
Sbjct: 180 ERITHNFGLEPLRRTDIGPYLMFRLRAAGYHGPDIFSPRALQDIDAASEGLTRRINILAD 239

Query: 240 AALKQAYQAGEPTLSLARIKLACQE 264
            A+  A+ A    +   +++ A ++
Sbjct: 240 KAMLAAFAANTHLVDQPQVQAAVKD 264