Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., type II secretory pathway, component ExeA (predicted ATPase) from Dechlorosoma suillum PS

 Score =  164 bits (416), Expect = 3e-45
 Identities = 100/271 (36%), Positives = 144/271 (53%), Gaps = 1/271 (0%)

Query: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60
           MYL  FG  E PF I P+  ++Y +  HQEA+  L   L  G GF  +TGEVGTGKT + 
Sbjct: 1   MYLKHFGLVEYPFGITPDTSFVYATTGHQEALNTLLVALRAGEGFVKITGEVGTGKTLLC 60

Query: 61  RAILASLPGKTRAGMILNPTFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAEHA 120
           R +L +L  K     + NP      L  A+ +E  +          L + L++ LL    
Sbjct: 61  RRLLQNLGDKFVTAYLPNPNLEPRTLYLALAEELRLKVAPDIDQYHLLKSLNKRLLDIAR 120

Query: 121 QGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQLA 180
           +G   ++ IDEAQ +  + LE LRLL+NLETE  KLL+ +++GQPEL +KL +P++RQL 
Sbjct: 121 EGKSTVVCIDEAQAMPLESLEALRLLSNLETEKRKLLQWVILGQPELDKKLGMPEIRQLR 180

Query: 181 QRITGRYHLLPLNEEQTADYIRFRIEQAS-GNPELFNRKACQWIAEQTHGIPRLINLVCD 239
           QRI   Y L  L   + A Y+  R+  A     ELF+  A + +   + G PRLIN++  
Sbjct: 181 QRIAFHYRLPGLGRREVAAYVAHRLRVAGYRGEELFSSGAIKGLHRASRGTPRLINILAH 240

Query: 240 AALKQAYQAGEPTLSLARIKLACQEVMSFQS 270
            AL   +  G   +    IK A ++    +S
Sbjct: 241 KALLAVFGEGHFQVRGKHIKAAARDTEGTRS 271