Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., general secretion pathway protein, ATPase from Marinobacter adhaerens HP15

 Score =  172 bits (435), Expect = 2e-47
 Identities = 101/268 (37%), Positives = 148/268 (55%), Gaps = 1/268 (0%)

Query: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60
           MY + FG  E PF++ PN RY   +  H +A+  L   L +  GF  ++GEVGTGKT + 
Sbjct: 1   MYESHFGLQEAPFALTPNTRYFLRAPSHGDALELLLVALKEREGFIKISGEVGTGKTLLC 60

Query: 61  RAILASLPGKTRAGMILNPTFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAEHA 120
           R +L+ L        I NP  +   L EA+ +E  V     A   ++ + ++E L++   
Sbjct: 61  RLLLSELEPIAETAYIPNPQLTPDTLYEAVAEELGVDMSGCANAHQVLKAINEKLISHAM 120

Query: 121 QGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQLA 180
               V+L+IDEAQ +  + +E LRLLTNLETES +LL+V+L GQPEL   L+   LRQL 
Sbjct: 121 AQKPVVLVIDEAQAMPEETIEALRLLTNLETESVRLLQVVLFGQPELDVLLKKQSLRQLN 180

Query: 181 QRITGRYHLLPLNEEQTADYIRFRIEQASGN-PELFNRKACQWIAEQTHGIPRLINLVCD 239
           QRIT  Y L PL+    A Y+R R+ QA  N  +LF   A + I   + GIPRL+N++  
Sbjct: 181 QRITFHYRLTPLDRNSVAQYLRHRLAQAGYNGADLFAPGALRLITRASGGIPRLVNILAH 240

Query: 240 AALKQAYQAGEPTLSLARIKLACQEVMS 267
            ++  A+  G+  +       A ++  S
Sbjct: 241 KSMLAAWGRGDRLIERGHAMQAIRDTES 268