Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., AAA ATPase from Marinobacter adhaerens HP15

 Score =  150 bits (379), Expect = 7e-41
 Identities = 90/255 (35%), Positives = 145/255 (56%), Gaps = 10/255 (3%)

Query: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60
           MYL FFG    PF I P   ++Y+SQ+H  A V++ + +    GF +++GE+G+GKTT+ 
Sbjct: 1   MYLEFFGLHRHPFRITPEDDFIYMSQQHSRAYVYMSSAIWSSEGFVVISGEIGSGKTTLL 60

Query: 61  RAILASLPGKTRAGMILNPTFSDLE---LLEAICDEFEVSYPKKATLKKLTQVLHEFLLA 117
           +  + +L G  +   +LN ++++LE   L   I  +  +     + +  L Q+  E+L  
Sbjct: 61  KKTIRNLEGDLK---LLNISYTNLESKDLFGLILRKAGLKVEDDSKVAMLFQIT-EYLER 116

Query: 118 EHAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLR 177
             A G  V+L IDEAQ+L  + LE +R+LT +E+     ++V+L+GQPEL  K  +  + 
Sbjct: 117 MAAAGTPVVLTIDEAQNLTRENLEDIRMLTGMESMGGPSMRVILLGQPEL--KAAVSAIP 174

Query: 178 QLAQRITGRYHLLPLNEEQTADYIRFR-IEQASGNPELFNRKACQWIAEQTHGIPRLINL 236
           QL+QR+   +HL  L   +TA+YI +R +    G  +LF+      I + +HGIPRLIN 
Sbjct: 175 QLSQRVKLFFHLEGLTAAETAEYIDYRLLVSGHGGNKLFDDDTVSEIHKLSHGIPRLINK 234

Query: 237 VCDAALKQAYQAGEP 251
           +CD  +  AY    P
Sbjct: 235 LCDGMMMCAYSEDRP 249