Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., IS481 family transposase ISAzs36 from Enterobacter sp. TBS_079

 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 33/255 (12%)

Query: 23  YLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVARAILASLPGKT----------- 71
           Y +  H++ +  ++  + +G   A+  G VG+GKT   R +   L  +            
Sbjct: 21  YETAHHKQLMKDIKGAIREGRLIAVC-GVVGSGKTVTLRRLQQQLMDENKIIVARSLSVD 79

Query: 72  ----RAGMILNPTFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAEHAQGIQVLL 127
               R   ++N  F DL        + +V  PK+   ++  + L E +         V L
Sbjct: 80  KQSVRLATLINALFYDL------AQDKQVQIPKQGERRE--RELQELVKKGKRP---VAL 128

Query: 128 MIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQLAQRITGRY 187
            +DEA  L    L  L+ L  +  +    L V+L G P+L+  LR P + ++  R T  +
Sbjct: 129 FVDEAHDLNGHTLTGLKRLMEVVEDGGGRLSVVLAGHPKLRNDLRRPTMEEIGYR-TDIF 187

Query: 188 HLLPLNEEQTADYIRF--RIEQASGNPE-LFNRKACQWIAEQTHGIPRLINLVCDAALKQ 244
            L  +   Q  +YI++  +I    G PE +   +A   +A +    P  + L    A++ 
Sbjct: 188 TLDGITGSQ-REYIQWLLKISIGKGKPEDILTTEAVDLLAMKLR-TPLQVQLHLTLAMEA 245

Query: 245 AYQAGEPTLSLARIK 259
            YQ GE  ++   ++
Sbjct: 246 GYQTGEKPITATLVE 260