Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., hypothetical protein from Enterobacter sp. TBS_079

 Score = 92.0 bits (227), Expect = 5e-23
 Identities = 104/522 (19%), Positives = 199/522 (38%), Gaps = 38/522 (7%)

Query: 1   MYLNFFGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVA 60
           MY + F F   PF  V      +L   HQ+    L+      G   + + +     T + 
Sbjct: 1   MYQSHFTFKTPPFRKVTRLSGDFLVPYHQDVFNLLKEKTQQAGICGLFSDD-----TLLL 55

Query: 61  RAILASLPGKTRAGMILN--PTFSDLELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAE 118
                +L       + +N  P  S   LL      +++S   KA   ++  V       +
Sbjct: 56  GQFSDALKNSDNRVLAINAFPKLSASSLL------YKLSPDTKAIASRIQAVDTVLQQWQ 109

Query: 119 HAQGIQVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQ 178
             +    +L+I   + +       L +L     E    L V+L G    + +  L Q   
Sbjct: 110 AGKTQATVLVISHTEAMKETCRTVLGMLLTRAQELGFHLSVVLTGA---ENQAALLQQSD 166

Query: 179 LAQRITGRYHLLPLNEEQTADYIRFRIEQASGNPELFNRKACQWIAEQTHGIPRLINLVC 238
           L + +   + L PL   +   Y++ + E+  G     +    + +   T G    +N + 
Sbjct: 167 LREYVHTHHTLRPLTCREYLSYVQAQCEEHGGESSPLSPARVRKMHAMTKGKISELNALA 226

Query: 239 DAALKQAYQAGEPTLSLARIKLACQEVMSFQSSVYQVASAKPPVPKLSYLSSALGGIALA 298
             ++  A+      +S   ++LA  EV+  +    ++A+             +L    L 
Sbjct: 227 HLSMLAAWTERASQVSPRHLRLAAAEVLPAKKQGKRLATV------------SLFASVLF 274

Query: 299 VVLAWQLPPQLDRVMQHYFPLP----EVVPPTEQRVFPQALRSALLNATSSEHALETLYA 354
               W     +   +    P+P        P +  V P  +   ++N   + H L   Y 
Sbjct: 275 AACGWYFTASMTARLPFSLPVPISWKHPTAPVQAPVVP-VIDKEIVNQPDAMHQL---YL 330

Query: 355 VWGYQASVLEQFCQTQADAVLWCEEQTGDWSTLQTYDLPAVLTLMMDDVPTYAVLYRLTG 414
           +WGY AS  +  CQ      L C++       L     P V  L   +   YAV+ R+  
Sbjct: 331 MWGYDASADDALCQNAVKVNLMCKQGNASPDALAGEGYPWVSELKTGNHLNYAVVARVGE 390

Query: 415 DQAELLVGGERYRIARQWLEPLWNGQFSLLWQAS--FSRTLKQGMQGADVALLESKLAQV 472
              +LL+    ++++R W      G ++ L + +      +     G ++  L+ +L+Q 
Sbjct: 391 TSMDLLMNNRTWQVSRNWFNRHATGNYTQLHRLTPEGKDAISATSDGKEMTWLDQQLSQA 450

Query: 473 LGEPERPREQFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRL 514
           L +PE   +++  ++ ++   FQ+  ++HVDGI G +TL +L
Sbjct: 451 LSQPETHAQRWTAEMMKRTRAFQQKMHLHVDGIPGEETLMQL 492