Pairwise Alignments

Query, 529 a.a., general secretion pathway protein GspA from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., general secretion pathway protein A from Burkholderia phytofirmans PsJN

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 9/247 (3%)

Query: 6   FGFDELPFSIVPNARYLYLSQRHQEAIVHLQAGLGDGGGFAMLTGEVGTGKTTVARAILA 65
           +G    PFS       LY+  R +     ++  L   GGFAM+ GE GTGK+ V R +  
Sbjct: 9   YGLKWNPFSPELPLEALYVPPRVENFCWRIENALVREGGFAMIHGEPGTGKSVVMRVLAE 68

Query: 66  SLPGKTRAGMI-LNPTFSDL-ELLEAICDEFEVSYPKKATLKKLTQVLHEFLLAEHAQGI 123
            L   T   ++ +N   S+L +    + D F +             +   ++    +   
Sbjct: 69  KLERLTDLTVVSINHPQSNLADFYREMGDIFGLELRPHNRWGGFRSLRDRWMSHLQSTRR 128

Query: 124 QVLLMIDEAQHLAPDVLEQLRLLTNLETESHKLLKVLLIGQPELQEKLRLPQLRQLAQRI 183
           + +L+IDEAQ ++P VL +LRL+ +   +S  LL V+L G   L +KLR  +L  L  RI
Sbjct: 129 RPILLIDEAQEMSPGVLNELRLMASARFDSQPLLCVVLAGDTRLTDKLRRDELLPLGSRI 188

Query: 184 TGRYHLLPLNEEQTADYIRFRIEQ---ASGNPELFNRKACQWIAEQTHGIPRLINLVCDA 240
             R       E+ +AD +   +E    ++G P+L        + E   G  R++  + + 
Sbjct: 189 RSRLG----TEKASADDLLACLEHLLASAGAPQLMTPPLRHTLCEHALGNYRVLTTLANE 244

Query: 241 ALKQAYQ 247
            L  A Q
Sbjct: 245 LLTTAAQ 251