Pairwise Alignments

Query, 256 a.a., general secretion pathway protein GspB from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., general secretion pathway protein B (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.9 bits (128), Expect = 5e-12
 Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 28/227 (12%)

Query: 49  GLVTAGVMTYQRYELVQQEVANRQTEPTTVQVDAPLERLAYPEFQDLQPTFVESGLDEPY 108
           G+V    +       +  EVA    E    +++A    +A     D +  F E    E  
Sbjct: 148 GMVNQAPLAVDPNADLSYEVAEETAEARAARLEA---LMAAGVTDDQRRAFDEVMQIEES 204

Query: 109 PEEDVTALADNIVAPPATIQASGQQSASNKALGDLDLTQLSPELALR-----------VQ 157
               V   + N+ AP     A+  Q+  +KA  +  L +  P+ A R           VQ
Sbjct: 205 RPRQVLTQSQNVRAPRDQGMAA-LQAEVDKAAAEFGLQRTEPKPASRDDSNTLSGDALVQ 263

Query: 158 A----IMRDQSSEPATPSTPTSAAVSLTQHSD--RY-------QGQLPALNFQMHAFSSN 204
           A    +   + +E A      +   ++ Q SD  RY       Q Q+P  N   H +S++
Sbjct: 264 AFEAALKEVEFTESANREVTPAPVSTIPQTSDYPRYGDLPAGLQLQVPEFNIMAHVYSND 323

Query: 205 EQKRWIKVNGVEYREGDMLTPEVKLESIKPQSSVIIFGGEEIEIPAL 251
             +RW+ V+G E +EGD +   + +  I+P+  V+   G   ++PA+
Sbjct: 324 PSQRWLNVDGTELQEGDNIKGSLSIVEIRPRDVVLSIDGTAFKVPAI 370