Pairwise Alignments

Query, 256 a.a., general secretion pathway protein GspB from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., general secretion pathway protein B (RefSeq) from Shewanella loihica PV-4

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 18/161 (11%)

Query: 103 GLDEPYPEEDVTALADNIVAPPATIQASGQQSASNKALGDLDLTQLSPELALRVQAIMRD 162
           GLD  Y EE       N     A  QAS QQ+          + + + +L    +A +++
Sbjct: 221 GLDAAYVEEQRA----NQGLEQAFDQASEQQA--EPVAEQRPVVKDTSKLVAAFEAALKE 274

Query: 163 QSSEPA--TPST-------PTSAAVSLTQHSDRYQG---QLPALNFQMHAFSSNEQKRWI 210
              E A  TP T       P +    L ++     G   Q+P  N   H ++++ + RW+
Sbjct: 275 VEKENAVATPVTQPKLDPIPAAQPDELPKYGQLPAGIQLQVPEFNILAHVYANDPKNRWL 334

Query: 211 KVNGVEYREGDMLTPEVKLESIKPQSSVIIFGGEEIEIPAL 251
            V+G E ++GDM+  ++K+  I+P+  V+   G E ++PA+
Sbjct: 335 NVDGAELQQGDMIGGKLKIVEIRPRDVVLEVAGTEFKVPAI 375