Pairwise Alignments

Query, 256 a.a., general secretion pathway protein GspB from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., general secretion pathway protein B (RefSeq) from Shewanella sp. ANA-3

 Score = 53.1 bits (126), Expect = 8e-12
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 20/144 (13%)

Query: 125 ATIQASGQQSASNKALGDLDL----TQLSPELALRVQAIMRDQSSEPA--TPST-PTSAA 177
           AT++A  +Q   N A  D+ L    ++   EL    Q  ++D     A  TP T P    
Sbjct: 226 ATLEALREQV--NAAAADVGLETAQSRKEDELVANFQDALKDVEYVKAAKTPVTEPKLDP 283

Query: 178 VSLTQHSD--RYQGQLPA--------LNFQMHAFSSNEQKRWIKVNGVEYREGDMLTPEV 227
           +   ++ D  +Y GQLPA         N   H +S++  +RW+ V+G E +EGD +  ++
Sbjct: 284 IPKVENDDIPKY-GQLPAGLQLQVPEFNIVAHVYSTDASQRWLNVDGAELQEGDQIGGKL 342

Query: 228 KLESIKPQSSVIIFGGEEIEIPAL 251
           K+ +I+P+  V+   G +  +PA+
Sbjct: 343 KIIAIRPRDVVLEIQGTQFRVPAI 366