Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  206 bits (523), Expect = 2e-57
 Identities = 119/313 (38%), Positives = 191/313 (61%), Gaps = 4/313 (1%)

Query: 88  TLLLIVVFVVLLLFAA----RVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKDEYGDVARE 143
           T++++V  V++ LF+     R +++  + L D +  ++    +E +  + +DE G++A  
Sbjct: 192 TVIMLVSGVLIGLFSLWLVNRNLVQPIRNLIDYVTRLSHGRFAERVTSNRQDELGNLAVA 251

Query: 144 LEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSST 203
               R  L +       ++ EL S +  +    S       E+F   DQ+ATAM+EMS+T
Sbjct: 252 ANTLRDFLAETFTRLQRSATELDSASGELNAIASLMSQGTSEQFERTDQVATAMNEMSAT 311

Query: 204 VQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAI 263
            Q VA HA +A+   ++A Q AQ G++ ++ TI  ++ +  +I+++A  + Q+E     I
Sbjct: 312 AQEVARHAADAARAADDADQSAQQGEKVMQGTIHTITRMRGEIANTATVIRQLETDSGRI 371

Query: 264 SSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMI 323
             V+  IR I+EQTNLLALNAAIEAARAGEAGRGFAVVADEVR+LAQRT ++ +EI ++I
Sbjct: 372 GKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTASSIIEINQII 431

Query: 324 SQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQS 383
             +Q+ A  A + +E    ++ + VE +T AG  L+ I   V+ + DMN QIA AA +Q+
Sbjct: 432 QTVQTGAVDAAHAIESGQSRSEESVEQVTQAGVMLERITQAVEAIRDMNRQIATAAEEQT 491

Query: 384 NVAEEMNENLNNV 396
           +VAE+++ NL  +
Sbjct: 492 SVAEDISRNLTEI 504