Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  217 bits (553), Expect = 6e-61
 Identities = 136/349 (38%), Positives = 213/349 (61%), Gaps = 8/349 (2%)

Query: 89  LLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMA--QRNLSEPIKMDCKDEYGDVARELEK 146
           +LL++  V LLL  A  +LR    + D +  +A  + +L+  + +  +DE G +A    +
Sbjct: 215 VLLVIAVVGLLL--ANAILRPLHLMKDNLDDIAAGEGDLTRRLTITSQDELGQLAGSFNR 272

Query: 147 TRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQT 206
              ++  L++   D + +LT L   ++     ++ + + + +E DQ+ATA++EMSS  Q 
Sbjct: 273 FVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVATAINEMSSAAQE 332

Query: 207 VAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSV 266
           VA  AQ A+   +   ++ Q+ ++ V  +I ++  L  DI SS  +++ +++ V +I SV
Sbjct: 333 VARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDSLQQDVASIVSV 392

Query: 267 VGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQL 326
           +G IRSI+EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LA RTQ +T EIQ MI +L
Sbjct: 393 LGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMIDRL 452

Query: 327 QSSANSAVNLMEKSVVQAADGV-ELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNV 385
           QS  ++AV  M +S  +A DG  E    AG+ LD +   +  +N MN QIA+AA +Q+ V
Sbjct: 453 QSGTHAAVEAMRRS-SEAGDGTSERANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAV 511

Query: 386 AEEMNENLNNVRELVEGSVTVMTEL-LETSEIMQSNAEELDRKITAFRV 433
           AEE+N +++ +   V+ SV   T+L  +TS  +    + L + +  FR+
Sbjct: 512 AEEINRSVHQIAVAVD-SVADETQLGAQTSRSLADLGQRLGKLVGQFRI 559