Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  229 bits (584), Expect = 2e-64
 Identities = 136/353 (38%), Positives = 213/353 (60%), Gaps = 6/353 (1%)

Query: 87  QTLLLIVVFVVLLL--FAARVMLRQT----QYLSDVIKLMAQRNLSEPIKMDCKDEYGDV 140
           + LL +V  + LLL   AA ++ +Q     QY    +  +A+ +LSEP++++ +DE G +
Sbjct: 166 KVLLGLVAAMTLLLGALAAWIITQQIVNPLQYTLQAVNRIARGDLSEPVQVNRRDELGQL 225

Query: 141 ARELEKTRRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEM 200
              L++    L +LI+       ++ S  E ++    +T      +  E D +ATAMSEM
Sbjct: 226 QSGLQQMMLNLHELIEGIRSGVIQVASAAEQLSAVTEQTNAGVNNQKTETDHVATAMSEM 285

Query: 201 SSTVQTVAEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERV 260
           ++TVQ VA  A+ AS+    A QQA  G+Q V   I+++  L+++++ SA AV  ++E+ 
Sbjct: 286 TATVQNVARDAEEASTAASAADQQASEGEQIVNEAIAQIKRLAEELNQSADAVRHLQEQS 345

Query: 261 VAISSVVGTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQ 320
             I  V+  I+++++QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA RTQ +T EI+
Sbjct: 346 EKIGGVLDVIKAVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLALRTQRSTEEIE 405

Query: 321 EMISQLQSSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAG 380
            +++ +QS  ++  + ME S +     VE    A   L+ I ++V ++  MN QIA AA 
Sbjct: 406 SLVAGVQSGTHAVASGMESSQLLGESSVEFTHRAVIALENITSKVSIIQAMNQQIATAAE 465

Query: 381 QQSNVAEEMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           QQS VAEE+N ++ NVR++ E + +   E   +S  +     EL+R +  F+V
Sbjct: 466 QQSAVAEEINRSVINVRDISEQTASTCEETASSSTELARLGHELERLVGRFKV 518