Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  213 bits (543), Expect = 8e-60
 Identities = 139/375 (37%), Positives = 205/375 (54%), Gaps = 9/375 (2%)

Query: 63  LLAATNSVEVAQQHYDNYLVQVFWQTLLLIVVFVVLLLFAA--------RVMLRQTQYLS 114
           +LA  N  ++A   Y   L QVF +        V +L+ A         R +L Q   L 
Sbjct: 114 VLARANGEQIAVLAYGPSLSQVFGERFANYAAAVFILMLAMLGASQLLIRFLLAQLNTLK 173

Query: 115 DVIKLMAQR-NLSEPIKMDCKDEYGDVARELEKTRRQLQDLIKLQIDASQELTSLTEVMT 173
           DV+  + +  +LS  + + C DE G +A      +   Q ++    + +++L      + 
Sbjct: 174 DVMLHVEKTGDLSARVPLACTDEVGQMASAFNAMQAGYQRVVNTVANTARQLDIGAARLA 233

Query: 174 MSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTVAEHAQNASSLTENASQQAQTGQQFVK 233
            SM+E +     + +E DQ ATA++EMS+TV  +A+HA     L++ A   A +GQ+ V 
Sbjct: 234 ASMNEVRHGMLGQQSETDQAATAINEMSATVYHIAQHAGATRDLSQTADSLAGSGQEVVI 293

Query: 234 STISKMSELSKDISSSAQAVNQVEERVVAISSVVGTIRSISEQTNLLALNAAIEAARAGE 293
                ++ LS  +  +A+ + ++ E    I+ VV  I SI+EQTNLLALNAAIEAARAGE
Sbjct: 294 RVQQSIAGLSSGVQQTAEMIQRLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEAARAGE 353

Query: 294 AGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQSSANSAVNLMEKSVVQAADGVELITN 353
            GRGFAVVADEVRNLA+R Q +T EI  MIS LQ+    AV+ M++S  +A D V+    
Sbjct: 354 MGRGFAVVADEVRNLAKRVQTSTDEITSMISALQAGTRDAVDFMQESSFKADDCVQQAQE 413

Query: 354 AGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAEEMNENLNNVRELVEGSVTVMTELLET 413
           AG+ L  I   V  + + N QIA AA QQS VAEEMN  + ++R++   +V    +   T
Sbjct: 414 AGAALAEITGAVAQMRESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTVNTVQQTVDSATT 473

Query: 414 SEIMQSNAEELDRKI 428
           S  + + A EL + I
Sbjct: 474 SNELATLAGELSKAI 488