Pairwise Alignments

Query, 433 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  213 bits (541), Expect = 2e-59
 Identities = 126/346 (36%), Positives = 200/346 (57%)

Query: 88  TLLLIVVFVVLLLFAARVMLRQTQYLSDVIKLMAQRNLSEPIKMDCKDEYGDVARELEKT 147
           TLL +V+ V+      R ++   +     ++ +A  +LSE  ++  +DE G + R +++ 
Sbjct: 295 TLLALVLGVLAAWLITRQIILPLRTTMADVERIASGDLSETAQIQRRDELGVLQRGIQQM 354

Query: 148 RRQLQDLIKLQIDASQELTSLTEVMTMSMSETKDSAQEEFNEIDQLATAMSEMSSTVQTV 207
              L++LI    D   ++++  E ++    +T      +  E DQ+ATAM EMS+TVQ V
Sbjct: 355 GSTLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHEMSATVQEV 414

Query: 208 AEHAQNASSLTENASQQAQTGQQFVKSTISKMSELSKDISSSAQAVNQVEERVVAISSVV 267
           A +A+ A+     A  +A+ G + V   ++++  ++  +  S +A+  ++E    I SV+
Sbjct: 415 ARNAEQAALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEESDKIGSVM 474

Query: 268 GTIRSISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQNATVEIQEMISQLQ 327
             IR+++EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LAQRTQ +T EI+ +++ LQ
Sbjct: 475 NVIRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAALQ 534

Query: 328 SSANSAVNLMEKSVVQAADGVELITNAGSELDGIVNQVQLLNDMNFQIAAAAGQQSNVAE 387
           +      ++M  S      GVEL   AG+ L  I   V  +  MN QIAAAA +QS VAE
Sbjct: 535 NGTQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAAEEQSAVAE 594

Query: 388 EMNENLNNVRELVEGSVTVMTELLETSEIMQSNAEELDRKITAFRV 433
           E++ ++ NVR++ E +     E   +S  +     +L   ++ FR+
Sbjct: 595 EISRSVVNVRDVSEQTAAASEETAASSTELARLGGQLQMMVSRFRL 640